Alcanivorax borkumensis: ABO_2176
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Entry
ABO_2176 CDS
T00380
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
abo
Alcanivorax borkumensis
Pathway
abo00260
Glycine, serine and threonine metabolism
abo00460
Cyanoamino acid metabolism
abo00630
Glyoxylate and dicarboxylate metabolism
abo00670
One carbon pool by folate
abo00680
Methane metabolism
abo01100
Metabolic pathways
abo01110
Biosynthesis of secondary metabolites
abo01120
Microbial metabolism in diverse environments
abo01200
Carbon metabolism
abo01230
Biosynthesis of amino acids
abo01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ABO_2176 (glyA)
09102 Energy metabolism
00680 Methane metabolism
ABO_2176 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ABO_2176 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ABO_2176 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ABO_2176 (glyA)
Enzymes [BR:
abo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ABO_2176 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
OKR_DC_1
SelA
Motif
Other DBs
NCBI-ProteinID:
CAL17624
UniProt:
Q0VMH4
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All DBs
Position
complement(2484813..2486069)
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AA seq
418 aa
AA seq
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MFPKSMSIAEFDPEIKAAIEAEEVRQEEHIELIASENYASPRVMEAQGSVLTNKYAEGYP
GKRYYGGCENVDVVEQLAIDRACELFGADWANVQPHSGSQANGAVYMAMLKAGDTVLGMS
LDAGGHLTHGAKPNFSGKTYNAVQYGLDNETGLIDYDQVASLAREHKPKMIVAGFSAYSQ
IVDWQRFRDIADEVGAILLVDMAHVAGLVAAGVYPSPVGIADITTTTTHKTLGGPRGGLI
MGKASEEIQKKINSAVFPGGQGGPLEHVIAAKAICFKEAMQDDFKGYQQQVVKNAQAMAG
VFIERGFDVVSNGTENHLFLLSLIKQDITGKDADAALGRANITVNKNAVPNDPRSPFVTS
GLRIGSPSITRRGFDEADAKALAGWICDILENMGDEGVIEQVKGKVKEICARLPVYER
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgaaatccatgtccatcgccgagtttgacccggaaatcaaggccgctattgag
gccgaagaagtccgccaggaagagcatatcgagctgatcgcctctgaaaactatgcctcg
ccaagggttatggaagcccagggctccgtactgaccaacaagtacgccgagggctatccg
ggcaagcgttattacggcggttgcgagaatgtggacgtggttgagcagttggctatcgat
cgggcctgtgagctgttcggcgcggattgggccaatgtgcagccgcattccggttcccag
gccaatggcgcggtttacatggctatgctcaaggcgggcgataccgtgttaggcatgagc
ctggatgccggtggccacctgacccacggtgctaagccgaacttctccggtaagacctat
aacgcggtgcagtatggtctggacaacgaaactgggctgattgattacgatcaggtggcg
tctctggcccgcgagcacaagccgaaaatgatcgtggccggcttctctgcctattcgcag
attgtcgactggcagcgtttccgtgacatcgccgacgaagtgggtgcgatcctgctggtg
gacatggcccacgtggcaggtctggttgctgcgggtgtgtacccgagcccggtaggcatt
gcggatatcaccacgaccactacccacaagaccctaggcggcccccgtggcggtctgatc
atgggtaaggccagcgaagagattcagaagaagatcaactctgctgtgtttcccggtggc
cagggtggcccgttggagcacgtgatcgccgctaaagcgatttgcttcaaagaagccatg
caggacgacttcaagggctaccagcagcaggtagtgaagaacgcccaggccatggccggt
gtgttcatcgagcgtggctttgatgtggtttccaatggcaccgagaatcacctgttcctg
cttagcttgatcaagcaggacattaccggtaaagatgcggacgccgccttgggccgcgcc
aacatcaccgtgaacaaaaatgctgtccccaacgatccgcgctccccgttcgttacctcc
ggcctgcgtatcggttccccctccatcacccgccgtggttttgatgaagcggatgccaag
gcgttggctggctggatctgcgacatcctcgagaacatgggtgatgaaggcgtgattgag
caggttaaaggcaaggttaaagagatttgtgctcgcctgccggtgtacgagcgctaa
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