Alcanivorax borkumensis: ABO_2185
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Entry
ABO_2185 CDS
T00380
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
abo
Alcanivorax borkumensis
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abo03400
]
ABO_2185 (radA)
DNA repair and recombination proteins [BR:
abo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABO_2185 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
GvpD_P-loop
AAA_22
DnaB_C
RecA
AAA_16
AAA
SLFN-g3_helicase
AAA_24
AAA_14
ABC_tran
PAXNEB
nSTAND3
DUF7125
AAA_18
Zn_ribbon_8
Viral_helicase1
cobW
Zeta_toxin
NTPase_1
AAA_29
HypA
Motif
Other DBs
NCBI-ProteinID:
CAL17633
UniProt:
Q0VMG5
LinkDB
All DBs
Position
complement(2494368..2495741)
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AA seq
457 aa
AA seq
DB search
MFVAKKKIAFVCTDCGADFPKWQGQCPACNAWNTLQEFVHDPATPSSKGAGSRGGFSGQL
SEVQNLNDIVLEETPRISSGMGELDRVLGGGLVPGSAILIGGHPGAGKSTLLLQTLCRLS
DSQSCLYITGEESLSQVAMRADRLKLPKEKLRLAAETDVEQILELARKEMPKVLVVDSIQ
VMFLAALQSAPGSVAQVRECAAALTRFAKQTGTVLLLVGHVTKDGTLAGPKVLEHMIDCS
LMLEGSTDSRFRTLRGLKNRFGAVNELGVFAMTGEGLKEVKNPSAIFLNRAEEIASGSLV
TVVWEGTRPLLVELQALVDASHFGNPRRICVGLEGNRLAMLLAVLHRHGGIQVGDQDVFM
NVVGGVKVTETAADLAQLLAIVSSFRDRALERELVVFGEVGLSGEIRPVPQGQERLYEAV
KHGFKKAIVPKANLPRKLPDGVDIIGVSNVAEALEYL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgtggccaagaaaaagatcgcgtttgtatgcacggattgcggagcggattttccc
aaatggcagggtcagtgtccggcctgtaatgcctggaataccttgcaagagtttgtccac
gatcctgctaccccatcatcaaaaggggcgggcagccggggcggcttttccggccagctg
tcagaagtgcaaaatctcaatgatattgtgctcgaagaaaccccgcgtatcagttccggc
atgggcgagctggatcgagtgctgggtggcgggttggtgcctggttcggccattctgatt
ggtgggcaccccggtgcggggaaatctaccttgctactacaaacgctgtgtaggctctct
gactcccaaagctgtttgtatatcaccggcgaagaatccttgtcgcaagtggctatgcgt
gctgaccgcctgaagctacccaaggaaaaactgcgactggcggcggagactgacgtggag
cagattctcgaattggcccgcaaggagatgccgaaggtgttggtggtggattctatccag
gtcatgtttctggcggcgttgcagtcggcgccgggcagtgtggctcaggttcgtgaatgt
gctgccgctctgactcgctttgccaagcagacgggaacagtgctgctgctggtgggccat
gtaaccaaggatggcaccctggcggggccgaaggtattggagcacatgattgattgttcc
ctgatgctggaaggatctacggattcgcgctttcgtaccctgcgtggcctcaagaatcgt
tttggggcggtgaacgagctgggcgtatttgccatgaccggcgaggggctgaaggaagta
aaaaatccttccgccattttccttaaccgggccgaggagatcgcttccggttctctggta
acggtggtctgggaaggaacccgtccgctgctggtggagctgcaggcactggtggacgcc
tcccacttcggtaaccctcggcgtatctgtgtggggttggaggggaatcggttggccatg
ttgctggcggtactgcatcgccatggtggcattcaggtaggcgatcaggatgtgttcatg
aatgtggtgggtggtgtgaaggttaccgaaacggctgcagacttggcccaattgctggct
attgtgtccagcttccgtgaccgggcgctggagcgcgagctggtggtgtttggtgaggtg
ggcttgtccggggaaattcggccggttcctcaagggcaggaacggctttatgaagcagta
aaacacggctttaaaaaagccattgtgccgaaagccaacttgcctagaaagctgccagac
ggggtggacattattggcgttagtaacgtggctgaggcgctggaatatctgtaa
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