Alcanivorax borkumensis: ABO_2210
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Entry
ABO_2210 CDS
T00380
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
abo
Alcanivorax borkumensis
Pathway
abo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ABO_2210 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abo03019
]
ABO_2210 (orn)
03009 Ribosome biogenesis [BR:
abo03009
]
ABO_2210 (orn)
Messenger RNA biogenesis [BR:
abo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABO_2210 (orn)
Ribosome biogenesis [BR:
abo03009
]
Eukaryotic type
Pre-60S particles
RNases
ABO_2210 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CAL17658
UniProt:
Q0VME0
LinkDB
All DBs
Position
complement(2523189..2523734)
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AA seq
181 aa
AA seq
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MTDKRNNLIWIDLEMTGLSPENDRIIEIATIVTDAELNVLAEGPVLAVHQSDALLDGMDE
WNTTHHNNSGLVARVKASTVNDAAAESQTIAFLEQYVEAGMSPMCGNSICQDRRFLANYM
PKLEAFFHYRNLDVSTLKELARRWKPDILPGFSKENKHLALDDIRESIAELVYYREHFID
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaagcgcaataatctgatttggatcgatctggaaatgaccggcctgagcccg
gaaaatgatcgcatcatcgaaatcgccactattgttactgatgccgagctaaacgtgttg
gcagaagggccggtgttggcggttcatcaaagcgatgcgctactggatggcatggacgag
tggaataccacccaccataacaactccgggctggtggccagagtgaaggccagcacggtg
aatgatgcggccgcggagtctcagactattgcgtttctggagcagtatgtggaagcgggt
atgtcgcccatgtgcggcaatagtatctgtcaggatcgccgttttctggccaactatatg
ccgaaactggaagccttcttccattatcgcaacttggatgtgtccaccctgaaagaattg
gcgcgtcgctggaagccggacatcctgccgggcttcagtaaagagaacaaacacctggcg
ctggatgatattcgcgagtccatcgccgaactggtgtattaccgcgagcactttattgac
gcttga
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