Alcanivorax borkumensis: ABO_2659
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Entry
ABO_2659 CDS
T00380
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
abo
Alcanivorax borkumensis
Pathway
abo03030
DNA replication
abo03410
Base excision repair
abo03420
Nucleotide excision repair
abo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABO_2659 (polA)
03410 Base excision repair
ABO_2659 (polA)
03420 Nucleotide excision repair
ABO_2659 (polA)
03440 Homologous recombination
ABO_2659 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abo03032
]
ABO_2659 (polA)
03400 DNA repair and recombination proteins [BR:
abo03400
]
ABO_2659 (polA)
Enzymes [BR:
abo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABO_2659 (polA)
DNA replication proteins [BR:
abo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABO_2659 (polA)
DNA repair and recombination proteins [BR:
abo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ABO_2659 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABO_2659 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
UPF0261_C
Motif
Other DBs
NCBI-ProteinID:
CAL18107
UniProt:
Q0VL41
LinkDB
All DBs
Position
3005056..3007926
Genome browser
AA seq
956 aa
AA seq
DB search
MPSPCCRLSLVACRSPLPLGPISATLSPSFSQQKSSPMSAAEKPIILVDGSSYLYRAFHA
LPPLTTSSGQPTGAVRGVASMLRKLIKDYDPQYMAVIFDAKGKTFRDELFEEYKSNRPPM
PDDLRAQVQPLHDLIRAMGLPLIIEDGVEADDVIGTFARIFGAQGKPVLISTGDKDMAQL
VTEHVTLINTMNNALYDIEGVKQKFGVGPELIIDFLALMGDKVDNIPGVPGVGEKTALGL
IQGLGSLEDIYANLDKIAELSFRGAKTMAKKLEEHKEMAFLSYQLATIKLDCELSEDLND
LKLGEPDNESLARYFKELEFKGWLSEILSGADASVVAAAEEAGNNEAAPAAGFNRDAYDI
VYSEAMLDKWLDKLKAAGEFAFDTETTSLNYMNAELVGFAVAVSDKAAYIPFGHNYPGAP
DQIDKQLVIDKFKPLLEDDSLKKIGQNLKYDMSVLAEDAGITLRGVAFDTMLESYVLDSV
ATRHDMDSLALKYLGRKTISFTDIAGKGAKQLTFNQIGLHEASPYAAEDADVTLRLHQTL
WPKLEAEDRLPEVFRDIELPLVTVLSRIERNGTYVDATLLKHQSQFLAKRMAELQEKAFD
IAGQEFNLASPKQLGEILYEKLEIPVIKKTPKGAPSTAEAVLQELAHDYPLPQVIMDYRG
VAKLKNTYTDKLPELINQRTGRVHTSYHQAVTATGRLSSSDPNLQNIPVRSEEGRKIRQA
FLAPKGKKIVACDYSQIELRIMAHLSGDKGLTDAFEQGLDIHRATAAEVWGKTLDEVSDN
DRRNAKAINFGLIYGMSAFGLAKQLGLPRKEAQEYIDLYFERYPGVKKYMEDTRALAIDK
GYVETVYGRRLYLPEIHSKNGQRRQGAERAAINAPMQGTAADIIKKAMIKVHDWLETTHF
DAKMIMQVHDELVFEVADDQVDDLVKEVKARMESAAELKVPLIVDAGAGENWEEAH
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcccgtgttgccgcttgtcgctagttgcttgtcgctcgcccctgccccttggc
cccatttccgctacactctctccatcattcagtcagcagaagtcgagccccatgtccgca
gccgaaaaacccatcatcctggtcgatggttcctcctacctgtaccgcgcctttcacgcc
ctgccgccgctcaccacctccagcggccagcccaccggggcggtgcgcggcgtcgcctcc
atgctgcgcaaactgatcaaggactacgacccgcaatacatggcggtgatcttcgatgcc
aagggcaaaacctttcgcgacgaactgtttgaagagtacaaatccaaccgcccgcccatg
cccgatgatctgcgcgcacaggtgcaacccctgcacgacctgatccgcgccatgggcctg
ccgctgatcatcgaagacggcgtggaagccgacgatgtgatcggcaccttcgcgcgcatc
ttcggcgcccagggcaagccggtgctaatctccactggcgacaaggacatggcccagctg
gtcaccgagcacgtgaccctgatcaacaccatgaacaacgccctctacgacatcgagggc
gtgaagcagaaattcggcgtgggcccggagctgatcatcgacttcctcgccctgatgggc
gacaaggtggacaacatccccggcgttcccggcgtgggcgagaaaaccgccctgggcctg
atacaggggctcggctccctggaagatatctacgccaatctggacaagatcgccgagctc
agcttccgtggcgccaagaccatggccaaaaagctggaagaacacaaagagatggccttc
ctctcctaccagctggccaccatcaaactggactgcgaactcagcgaagacctcaacgac
ctaaaactcggcgaaccggacaacgaatccctggcccgctatttcaaggaactggaattc
aaaggttggttgagcgaaatactctccggtgccgacgccagcgtagtggccgctgccgaa
gaggccggtaacaacgaagccgcccccgccgccggtttcaaccgcgacgcctacgacatc
gtctacagcgaagccatgctggataaatggctggataaactgaaagccgccggcgagttt
gccttcgataccgaaaccaccagcctcaactatatgaacgccgaattggtgggcttcgcc
gtggccgtcagcgacaaggccgcctatatcccctttgggcacaactaccccggcgcccca
gaccagatcgacaagcagttggtgatcgacaagttcaagccgttgctcgaagacgacagc
ctcaagaaaatcggccagaacctgaaatacgacatgagcgtgctcgccgaagacgccggc
atcaccctgcgcggcgtcgccttcgacaccatgctggaatcctacgtgctcgattccgtg
gccacccgccacgacatggattccctggcgctcaagtacctgggccgcaagaccatcagc
tttaccgacatcgctggcaagggcgccaagcagctcaccttcaaccaaatcggcctgcac
gaagccagcccctacgccgccgaagatgccgacgtgaccctgcgcctgcaccagaccctg
tggccgaaattggaagccgaagaccgactgcccgaggtgttccgcgacatcgagctgccg
ctggtcactgtgctcagccgcatcgaacgcaacggcacctacgtggacgccaccctgctc
aagcaccaaagccagttcctcgccaaacgcatggcggaactgcaagaaaaggccttcgac
atcgccgggcaggaattcaatctcgccagccccaaacagctgggcgaaattctctacgaa
aagctggaaatcccggtcatcaagaagacccccaaaggcgcgccgtccaccgccgaagcg
gtgctacaagagctggcccatgactacccactgccccaggtgatcatggattaccgcggc
gtggccaagctgaaaaacacctacaccgacaaactgccggaactgatcaaccaacgcacc
ggccgcgtgcacacctcctaccaccaggcggtgaccgccaccgggcgcttgtcttccagt
gacccgaacctgcaaaacattccggtgcgcagcgaagaaggccgtaagattcgccaagcc
ttcctcgcccccaaaggaaagaaaatagtcgcctgcgattactcacaaatcgagttgcgc
atcatggcgcatctgagtggcgacaaaggcctcacggatgccttcgaacagggcctggat
attcaccgcgccaccgccgccgaagtgtggggaaaaaccctggacgaggtcagcgacaac
gatcgccgcaacgccaaggccatcaacttcggccttatctacggcatgagcgccttcggc
ctcgccaaacaactgggcctgccgcgcaaggaagcccaggaatacatcgacctctatttc
gagcgttaccccggcgtgaaaaaatacatggaagacacccgcgcgttagcgatagacaaa
ggctacgtggaaaccgtttacggtcgccgtctctacctgccggaaatccacagcaaaaac
ggccaacgccgccaaggcgccgaacgcgccgccatcaacgcccccatgcaaggcaccgcc
gccgacatcatcaagaaagccatgatcaaagtgcacgactggctggaaaccacccacttc
gacgccaaaatgatcatgcaggtacacgatgaactggtgtttgaagtggcggacgatcag
gtggatgatctggtcaaggaagtaaaggcgcgcatggaatcagcggcggagttgaaagtg
ccgttgattgtggatgcgggcgctggggagaactgggaagaggcgcattga
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