Alcanivorax borkumensis: ABO_2666
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Entry
ABO_2666 CDS
T00380
Name
(GenBank) GAF/PAS/GGDEF domain protein
Organism
abo
Alcanivorax borkumensis
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Ortholog
Paralog
GFIT
Motif
Pfam:
GGDEF
PAS_3
GAF
PAS
GAF_2
PAS_9
GGDEF_2
PAS_4
PAS_8
GAF_3
Motif
Other DBs
NCBI-ProteinID:
CAL18114
UniProt:
Q0VL34
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Position
complement(3013845..3015308)
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AA seq
487 aa
AA seq
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MQDRGDFSLTGLRELHQLSLLPSGDFNALYAAYLEVGRSLLELSIGIVSCIKDGDYEVLA
VQPGDGGISPGDHFPLGDTYCSTVMSKQGSVALHHVGELEEMRSHPVYVGMQLESYIAVP
LYVQGEIFGTLNFSDPSPRREAFSIEEMEFLELMGKSLSQTLEQDRLSQQQQAAVSKMEE
NMALFEGAFRHAAIGMAIVSPQGGWMRVNQALCSILGYDEEALLASDFQTITHPDDLETD
LHHVEEMLTGKRSSYWMKKRYIHKNGHIVWVLLAVSLVRNGDGSPRYFLSQIEDITAQVT
AELTLREKQGELEELNQELASMARTDPLTGLYNRLVLMEGLRQEFSRCERRSEPMSVIFM
DVDHFKQYNDSYGHVEGDAALQAVAEALRPVIRDTDVLARYGGEEFVALLPTANSQDAER
VAERCRRAVAEISSLSRPVSLSVGVATLRFGDEADETKSPESLLSAADRALYVAKGAGRN
RVHTAQL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatcggggtgatttcagccttaccggcctgagagaattacaccagctctcattg
ctgcctagcggggactttaatgcactttatgcggcctacctagaggtggggcgcagcctg
ctggagctttctattggcattgttagttgcattaaagacggtgactacgaagtgctagcg
gtgcaaccgggcgatggtggtatcagccccggtgatcatttccctctgggtgatacttac
tgctccaccgtaatgagcaagcaaggctcggtagcgttgcaccatgtgggtgaactggaa
gagatgcgttcgcacccagtgtatgtggggatgcagttagaatcctatatagctgtgccg
ttgtatgtgcagggtgagattttcggcacccttaatttcagtgatccgtcaccgcgccgt
gaagctttcagcatcgaggaaatggagtttttggaattgatggggaagtctctcagccag
acgctagagcaggaccggctgagtcaacaacagcaagcggccgttagtaaaatggaagag
aacatggccctgttcgaaggggcttttcgccacgcagccatcggcatggcgattgtgtcg
ccgcaaggcggctggatgcgggtgaatcaagcgctgtgcagcattctgggttatgacgaa
gaggcgctgctggccagtgacttccagaccataacgcacccggatgacctggaaaccgac
ttgcatcatgtggaagagatgctgacaggcaaacgtagcagttactggatgaagaaacgc
tatatccataagaatggccatattgtctgggtgttgttggccgtctctcttgtccgtaat
ggggatggttcgccccgttattttttatcccaaatcgaagatatcaccgctcaagtaacg
gcggaattgaccctgcgcgaaaaacagggcgagctggaggagctcaaccaagagctggcg
agcatggctcgtactgacccgctcaccgggctctataaccgattggtgttgatggaaggt
ttgcgccaagagttcagtcgctgtgagcgtcgtagcgagcctatgtcggtaattttcatg
gatgtggatcatttcaagcagtacaacgatagctacgggcacgtagaaggggatgcggcc
ctgcaggcagtggccgaggctctgcgtccggttattcgtgataccgatgtgttggcgcgt
tacggtggcgaagagtttgttgccttgctgcccaccgctaattcgcaagatgctgaaagg
gtggcagaacgttgtcgccgtgccgtggcggagatttcttcgctcagcaggccggtgagc
ctgagtgtgggtgtggccacgctcaggttcggtgatgaagctgatgaaacgaagagcccc
gaatcgctactaagcgcggcggatcgagcgctttatgtagcgaagggggccggccgcaac
cgcgttcataccgcgcagctctaa
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