Alcanivorax borkumensis: ABO_2690
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Entry
ABO_2690 CDS
T00380
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
abo
Alcanivorax borkumensis
Pathway
abo03420
Nucleotide excision repair
abo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABO_2690 (uvrD)
03430 Mismatch repair
ABO_2690 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abo03400
]
ABO_2690 (uvrD)
Enzymes [BR:
abo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABO_2690 (uvrD)
DNA repair and recombination proteins [BR:
abo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABO_2690 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ABO_2690 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
ANTAR
Motif
Other DBs
NCBI-ProteinID:
CAL18138
UniProt:
Q0VL10
LinkDB
All DBs
Position
complement(3036477..3038639)
Genome browser
AA seq
720 aa
AA seq
DB search
MDDVTSLIDGLNPAQRDAVAADDQHLLVLAGAGSGKTRVLVHRIAWQIATEQASPFGILA
VTFTNKAAAEMRGRIEQLLDMSADGMWVGTFHGIAHRLLRAHWQEAGLPQGFQIIDADDQ
IRLIKRVSKELGLDEQRWPARQATWFINSQKDEGLRARHMDTGGDLFALTMQKIYFAYEE
ACERGGLVDFNEMLLRVLELFRDNDNLRGHYQRRFRHILVDEFQDTNSIQYAWLRLLADE
NNAVTIVGDDDQSIYGWRGAKIENIHKFSRDFPDTRTIRLEQNYRSTGTILKAANAVIGH
NSDRLGKELWTEGGDGDLIRLYSGFNEVDEARFIAGRMDKLFQEGTARREMAVLYRSNAQ
SRVLEEAFLQAGIPYRIYGGQRFFERVEIKNALAYLRLLSHRHADAAFERVVNTPTRGIG
NKTLETLREVARQRNVSLWDAAQAVVSEQLLTARAINALAVFLNLIAQLEQQCDGLSLAE
TTEHVIEASGLLEFHGKEKGEKGQQRLENLRELLSATREFGDEDEDSELDSLTAFLDHAA
LESGEGQADAHEDAVQMMTLHSAKGLEFPVVFITGMEEGLFPHKMSSEEPGRLAEERRLC
YVGLTRAMRELYLTHAESRRLYGNENYNPPSRFLREIPAETLEEVRARAGFSRPMGGAAK
PIRETESNGISLGARVLHPKFGEGTILQFEGQGPNARLQINFDGAGTKWLVSQYARLEVI
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgtgacttcccttattgatggtttgaacccggcccagcgcgatgcggtggct
gccgatgatcaacacttgctggtgctggcgggggccggttccggcaaaacccgcgtgttg
gtacaccgtatcgcctggcagattgccaccgaacaggcttcgccgttcggtattttggcg
gtgacctttactaacaaagccgctgcggaaatgcgcgggcgtattgagcagctgctggac
atgtctgccgatggcatgtgggtgggcacttttcatggtattgcccatcgcctgctgcgc
gcccactggcaggaggccggtctcccccaaggcttccagatcattgatgcggatgaccaa
atccggctgatcaagcgagtcagcaaggaattgggcctggatgaacaacgctggccagcc
cgtcaggccacctggtttattaatagtcagaaagacgaaggactccgcgctcggcatatg
gataccggcggcgacctgttcgcgttgaccatgcagaagatctacttcgcctatgaagag
gcctgcgagcggggcgggttggtagatttcaacgaaatgctgctacgggtactggagctg
ttccgcgacaacgacaacctgcgcggccactaccagcgtcgcttccggcacattttggta
gacgagttccaagataccaacagcatccagtacgcctggttgcggttgctggcggacgaa
aataatgcggtcaccattgtcggtgacgatgatcagtccatttatggctggcgtggcgcc
aagatcgagaacatccacaaattcagccgcgacttcccggatacccgtaccattcgcttg
gagcagaattaccgttccaccggcactattctgaaagcggccaacgcggtgatcggccat
aacagtgaccgcctaggcaaggaactgtggaccgagggcggcgatggcgatttgatccgc
ctctattccggtttcaatgaagtggatgaagcgcgctttattgccgggcgcatggataag
ctatttcaggaaggcaccgcgcggcgggaaatggcggtgctgtaccgctccaacgcccag
tcgcgggtgctggaagaggcttttctgcaggcggggattccctaccgtatctatggcggg
caacgcttcttcgagcgggtggaaatcaaaaatgcactggcctatctgcgcctactcagc
caccgccatgcggatgccgccttcgagcgagtggtgaacacacccacccgcggcattggc
aacaagaccctagaaaccctgcgtgaggtggcgcggcagcgtaacgtgtccctgtgggac
gctgcccaggcagtcgttagtgagcagttgcttaccgctcgagccattaatgcgttggcg
gtgttcctgaatctaatcgcccagctggagcagcagtgcgatgggttgtcgttggcggaa
actaccgagcatgtgattgaagccagtgggttgctggaatttcatggcaaggaaaagggc
gagaagggccagcagcggctggaaaacctgcgcgaactgctttctgccacccgggaattc
ggtgatgaggatgaggactccgagctcgatagcctcaccgcatttctggatcacgcggcg
ctggaatccggggagggccaggctgacgcccacgaggacgcggtgcagatgatgaccctg
cactcggccaaggggctggaatttccggtggtctttattaccggcatggaagaaggcttg
ttcccccacaagatgtccagcgaagagccgggccggttggcggaagagcgccgcctttgc
tacgtgggcctgacacgggccatgcgcgagctgtatctgacccacgcggaaagccgccgg
ttgtacggtaacgaaaattacaatccacccagccgttttctgcgagagattcccgccgaa
acgctggaggaagttcgcgcccgtgcagggttcagccggcccatgggcggtgcggctaaa
cccattcgtgaaaccgagtctaacggcatcagcctgggtgctcgggtgttacacccgaaa
ttcggggaaggtacgattttgcaatttgaagggcaggggcctaatgcgcgcctacaaatc
aatttcgatggcgcgggcaccaaatggctggttagccaatacgctcggctggaagtgata
tag
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integrated database retrieval system
