Apilactobacillus bombintestini: D7I45_01555
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Entry
D7I45_01555 CDS
T07159
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
abom
Apilactobacillus bombintestini
Pathway
abom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
D7I45_01555
09124 Replication and repair
03420 Nucleotide excision repair
D7I45_01555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abom03021
]
D7I45_01555
03036 Chromosome and associated proteins [BR:
abom03036
]
D7I45_01555
03400 DNA repair and recombination proteins [BR:
abom03400
]
D7I45_01555
Enzymes [BR:
abom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
D7I45_01555
Transcription machinery [BR:
abom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
D7I45_01555
Chromosome and associated proteins [BR:
abom03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
D7I45_01555
DNA repair and recombination proteins [BR:
abom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
D7I45_01555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
PDDEXK_1
Helicase_C
PhoH
DUF5737
HBB
Motif
Other DBs
NCBI-ProteinID:
AYF92266
UniProt:
A0A387AU45
LinkDB
All DBs
Position
complement(340386..342749)
Genome browser
AA seq
787 aa
AA seq
DB search
MNRIGIRDLVEFTLRSGDLNARLNSNNTAKQGARIHRKLQKQRFSDYDAEYYLDKTLKIN
NIDFHLDGRADAVKMSEKSAEIVEIKTSDVEFKQLPDSILTLYWGQIKTYAYLLMDKFPQ
YDEVNLTLTYVQTPDDIIHSEHLTISKDDAKQFFDHLIKEYEEWLKLRTDIIKKRNQTAK
QMKFPFAKFRKGQRELAAVVYKTIASQKHLFTQAPTGTGKTISTLFPAVKAMGEDLANRI
FYLTAKQSTRAVAQEAMDLMMKKGLFIKSITLSAKEKITFKEEADLKPEDNPYMIGYYDR
LKPAIKDALEHENEITFETIQQYARQYKIDPFEFSLDLSQFCDVIICDYNYLFDPQVHLQ
RYFTVEDSDNVFLIDEAHNLVNRSRDMYSAQLSNRPLDNLIKQSKDNVEENEALHKALKS
FKRSYTINTKPLTDGDENYVNLDHLLKAFNKQVSHLSDVISDWLAKDHDDDELNDAIVDY
YFQLISYQKISDWFDDTFKTRLFYDRDGYVIVKLFCMDPSYFLAQSLQLGGSAILFSATL
SPMDYYQRVLGDEDDSLTYEMSSPFEDSHQQIIMTNYIETTYKKRDQSITPIVQTIDAMI
KSKTGHYLIFLPSTHYLTQVVEAFQKKHPTIDTIVQKSHMEPDERQDFINTFKHDDNRTL
VGFALLGGIFCEGIDLKGTHLIGVGIVSVGLPGLNPENDLIKHFFDAENGHGFDFAYQLP
GLNNVFQAAGRLIRTNKDLGNVVLMDRRFQQRRYRRFFPRNWNSRNLATSYNLKQTQQLL
QNFWRRH
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atcaatcgtattggaattcgtgatttagtagaatttaccttacgtagtggtgatttaaat
gcccgtcttaacagtaataacaccgctaaacaaggtgctcgaattcatcgtaaattgcaa
aagcaacgtttttctgattatgacgcagaatactatctagataaaaccttgaagataaat
aacattgattttcatttagatggtcgtgccgatgccgttaaaatgtccgaaaaatcagct
gaaatagtagaaattaaaacctccgacgtagaatttaaacaactccctgacagtattttg
acgctttattggggacagattaaaacctacgcttatttgttgatggataaattcccccaa
tacgatgaagttaacctcactttaacctacgtacaaactcctgacgatattattcacagt
gagcatttaactatcagtaaagatgacgccaaacaattctttgatcatttaattaaagaa
tatgaagaatggttaaaacttcgtactgatatcatcaagaagcgtaatcaaactgctaaa
caaatgaagtttccttttgctaaatttcgtaaaggtcaacgtgagttagctgccgtagtt
tataaaactattgcttcgcaaaagcacttatttactcaagcacctactggtaccggaaaa
actatttctaccttattccctgctgttaaagctatgggtgaagatttagccaatcgaatt
ttttatctaactgccaagcaaagtacgcgtgccgtagctcaagaagctatggatttaatg
atgaaaaaaggtttattcattaaaagcattactttatccgctaaagaaaaaatcactttc
aaagaagaagcggatttaaagccggaagataatccttatatgattggttattatgaccgt
ttaaagcctgccattaaagatgctttagagcatgaaaatgaaattactttcgaaactatt
caacaatatgctcgccaatacaagattgaccccttcgaattttcactagatttgagccaa
ttttgtgacgtaattatttgtgattacaattacttatttgatccacaagtacatctacaa
cgttacttcacggtggaagattccgataatgtcttcttaattgatgaagcacacaacttg
gtaaatcgttctcgtgatatgtattcagctcaattaagtaatcgtcctttagataattta
attaagcaaagcaaagataacgtagaggaaaacgaagcgctacataaagccttaaagagt
tttaagcgttcttataccatcaacactaagccgttaactgatggcgatgaaaattatgta
aatttagatcatttactaaaagctttcaacaaacaggttagtcatttatccgatgtcatt
agtgattggttagctaaagaccatgatgatgacgaattaaatgacgccattgtcgattat
tattttcaattaattagttatcaaaaaatcagtgactggtttgatgatactttcaaaacg
cgtttattttatgaccgtgatggatatgtaatcgttaaattgttctgtatggatcctagt
tattttctagcacaatccctacaacttggtggtagcgccattttattctctgctacttta
tcccctatggattattatcaacgtgttttaggagacgaagacgatagcctaacttatgaa
atgtcgtcacctttcgaagatagtcatcaacaaattattatgactaactatattgaaact
acttataaaaagcgtgatcaaagtattacacctattgtgcaaactattgatgccatgata
aaaagtaaaactggacattatttaatctttttaccttccacgcattatttaacacaagtg
gtcgaagcctttcaaaagaagcatcccactatcgacaccatcgtgcaaaaatcacacatg
gaacccgatgaacgtcaagacttcataaataccttcaagcatgatgataatcgtacatta
gtcggttttgcgcttttaggcggtattttctgcgaaggtattgacttaaaaggtactcac
ttaattggagtaggcattgtttcggtaggtcttccgggtctaaatcctgaaaatgattta
attaaacatttctttgatgccgaaaatggccatggctttgattttgcttatcaacttcct
ggtttaaataacgtctttcaagctgcaggacgtctaattcgtactaataaagatttagga
aacgtagtgctaatggatcgtcgcttccaacaacgtcgttaccgtcgcttcttccctcgc
aactggaattctcgtaatctagctaccagttataatctaaaacaaacgcaacaattacta
caaaacttctggagaaggcattaa
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