Apilactobacillus bombintestini: D7I45_01945
Help
Entry
D7I45_01945 CDS
T07159
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
abom
Apilactobacillus bombintestini
Pathway
abom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D7I45_01945 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abom03021
]
D7I45_01945 (rpoC)
03400 DNA repair and recombination proteins [BR:
abom03400
]
D7I45_01945 (rpoC)
Enzymes [BR:
abom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D7I45_01945 (rpoC)
Transcription machinery [BR:
abom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D7I45_01945 (rpoC)
DNA repair and recombination proteins [BR:
abom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D7I45_01945 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AYF92332
UniProt:
A0A387ANR9
LinkDB
All DBs
Position
415943..419605
Genome browser
AA seq
1220 aa
AA seq
DB search
MVDVNKFSSMQIGLASSDKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVTDPGDTPLEYKQLVSEQDYRDKKLEYGNRFHAEIGAEAIKTLLN
QVDINKEVAELKDELKKATGQKRVRAVRRLDILEAFLKSGNELSWMVMEAIPVVPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLALHAPGIIVQNEKRMLQEAVDALVDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPSLKFNQMGLPVP
MALELFKPFIMKELVQRGDASNIKSAKRKIERKDEEVFDVLDDVIKEHPVLLNRAPTLHR
LGIQAFEPVLVSGKSMRLHPLACEAYNADFDGDQMAIHVPLSDEAQAESRLLMLAATHIL
APRDGNPIVAPSQDMVIGNYYLTMEEVGREGEGMIFNSPQEAVLSYQNGLTHWHTRVGIA
ASSMPEKPFTDEQKDKILVTTIGKIIFNSILPKTFQYLNEPTETNLHGHLSDSFFLEPGE
DIHEHLKNAPLNASFKKGFLSDIIAEVYKNYKVTVTSHLLDAMKDLGYDESTKSGLTVGI
TDVTNLKSKPRIIEDSHKKVENVTKQFRRGLITDQERYERVIGIWSDAKDEIQNDLLKSF
DPQNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGEIMELPITANFREGLSVLEMFIST
HGARKGMTDTALKTANSGYLTRRLVDVAQDVIIREEDCGTDRGVVVTALKQGNEMIEPLY
DRILGRYAMKTVKDPKTGEVIVKRNQMINEPEAEAIENAGIKEVEIRSAFTCNTVHGVCE
KCYGRNLATGSPVEVGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGNNDITQGLPRVQEI
FEARNPKGKAEISEVTGTVTLIEENPAERIKEVTVKGDADTRTYKVPINARMKVAEGDFI
HRGQAINEGSIDPKELIKVRDSLSTEVYLLSEVQKTYRMQGVEVSDKHAEIMVRQMLRKV
RIMDAGDTDVLPGTLMDINDFKKANADAVISGKIPATARPVILGITKAALETNSFLSAAS
FQETTRVLTDAAIRGKNDPLVGLKENVIIGKLIPAGTGMKTYGDIKPKVEGQSSEKSDSN
EVYSISQLEKRMKEEDVNNK
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgatgtaaataaattttcaagcatgcaaattggattagcatcttctgataagatt
cgtagttggtcatatggtgaagttaaaaagccagaaactattaactacagaaccttaaaa
ccagaaaaagatggtttattcgacgaaagaatttttggtccaactaaggactgggaatgt
gcttgtggtaaatataaacgtattagatacaagggtatcgtctgtgatcgttgtggggtt
gaagttactcgttcaaaagtacgtcgtgaacgtatgggacacattgaactagctgctcct
gtaacacacatttggtacttcaaaggaattccaagtcgtatgggacttgtattggacatg
agtccacgtgcattggaagaaattatttactttgcatcttatgttgttactgatcctggt
gatactccactagaatacaaacaattagtttcagaacaagactaccgtgacaagaagctt
gaatacggtaatcgtttccatgccgaaatcggtgcggaagctattaagactttattaaat
caagttgatattaataaagaagttgctgaactaaaagatgaattaaagaaagctactggt
caaaaacgtgttagagcggtaagacgtctagacatcttggaagccttcctaaaatccgga
aatgaattatcatggatggtaatggaagctattccagttgttccacctgacttaagacca
atggttcaactagaaggtggccgttttgccacatctgacttaaacgacttataccgtcgt
gttattaacagaaataaccgtctaaagagattacttgcattacatgctcctggtatcatc
gttcaaaacgaaaaacgtatgttacaagaagctgtggatgctttagtagataatggtcgt
cgtggtcgtcctgttaccggtcctggtaaccgtccacttaagtcactatctcacatgcta
aaaggtaagcaaggtcgtttcagacaaaacttacttggtaagcgtgttgactactctggt
cgttctgttattgatgttggtccatcattgaaattcaaccaaatgggacttcctgttcca
atggctctagaactattcaaaccatttattatgaaagaattagttcaacgtggtgatgct
tctaacattaagtcagcaaaacgtaagattgaacgtaaggatgaagaagtatttgatgta
ttggatgacgttattaaagaacatccagtattacttaaccgtgcacctaccttgcataga
ttaggtattcaagctttcgaaccagtattagtttctggtaaatccatgcgtttgcatcct
ctagcttgtgaagcttacaacgccgattttgatggggaccaaatggctatccacgttcct
ctatcagacgaagctcaagctgaatcaagactattgatgcttgctgctactcatatcctt
gctcctcgtgatggtaatcctatcgttgcaccttcacaagatatggttattggtaactac
tacctaaccatggaagaagtaggacgtgaaggagaaggtatgatctttaacagcccacaa
gaagctgtattatcataccaaaatggtttaactcactggcacactcgtgtaggtattgct
gcatcatcaatgccagaaaagccatttactgatgaacaaaaagataaaatcttggtaact
actattggtaagattatcttcaatagtattcttccaaagactttccaatacttgaatgaa
ccaactgaaactaacctacatggtcatctatcagacagtttcttcctagaacctggtgaa
gatatccatgaacacttgaagaatgcaccattaaatgcatcattcaagaaaggtttctta
tcagatatcattgctgaagtatacaagaactacaaagttactgtaacttctcatttacta
gatgctatgaaggacctaggttatgatgaatcaactaagtctggtttaactgttggtatc
actgatgttactaacttgaagtccaagccaagaattattgaagattcacataagaaagtt
gaaaacgttactaaacaattccgtcgtggtttgattactgaccaagaacgttacgaaaga
gttattggtatctggagtgacgctaaggatgaaatccaaaacgacctattgaagagtttc
gatcctcaaaaccctatctttatgatgagtgattctggtgctcgtggtaacatttcaaac
tttactcaattagctggtatgcgtggtttgatggctgctcctaatggtgaaatcatggaa
ctacctatcactgctaacttccgtgaaggtctatctgtcttggaaatgttcatttctacc
cacggtgctcgtaaaggtatgactgatactgccttgaagactgccaactcaggttactta
acacgtcgtcttgttgatgttgcccaagatgtaattatcagagaagaagactgtggtact
gatcgtggtgttgttgttactgccttgaaacaaggtaatgaaatgattgaaccactatac
gacagaatccttggtagatatgcaatgaagacagttaaagatcctaagactggcgaagta
attgtaaaacgtaatcaaatgattaatgaaccagaagctgaagcaattgaaaacgctgga
attaaagaagtagaaattcgttcagcatttacttgcaacactgtacatggtgtttgtgaa
aaatgttatggacgtaacttagcaactggttctcctgtagaagtaggggaagctgttggt
acagttgccgctcaatcaattggtgaacctggtactcaattaactatgagaaacttccat
accggtggtgttgctggtaacaacgatatcacccaaggtcttcctcgtgttcaagaaatt
ttcgaagctagaaaccctaaaggtaaagctgaaatttctgaagttactggtacagtaaca
ttaatcgaagaaaaccctgctgaaagaattaaggaagttactgttaaaggtgacgcggac
acaagaacttacaaagttccaattaatgcccgtatgaaggttgctgaaggcgactttatt
cacagaggtcaagctatcaacgaaggttcaattgatcctaaggaattaatcaaagttaga
gattcactatcaactgaagtttacttgctaagtgaagttcaaaagacttaccgtatgcaa
ggggtagaagttagtgataagcacgccgaaatcatggttcgtcaaatgctacgtaaggta
agaatcatggatgctggtgacactgatgtattacctggtactctaatggacattaatgac
ttcaagaaagccaatgctgatgccgttatttctggtaagattccagcaactgcacgtcca
gttatcttaggaattactaaggctgccctagaaactaacagtttcttatcagctgcatca
ttccaagaaactactcgtgttctaacagatgctgctatccgtggaaagaacgatccatta
gttggtcttaaggaaaatgttatcattggtaagttaattcctgccggtactggtatgaag
acttacggtgacattaaacctaaagttgaaggacaaagttctgaaaaatctgattccaac
gaagtttattcaattagccaattggaaaaacgtatgaaggaagaagacgtaaataacaaa
tag
DBGET
integrated database retrieval system
