Apilactobacillus bombintestini: D7I45_02675
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Entry
D7I45_02675 CDS
T07159
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
abom
Apilactobacillus bombintestini
Pathway
abom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D7I45_02675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abom03400
]
D7I45_02675
Enzymes [BR:
abom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D7I45_02675
DNA repair and recombination proteins [BR:
abom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D7I45_02675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD_C
UvrD-helicase
AAA_12
nSTAND3
HHH_5
PIF1
AAA_22
SLFN-g3_helicase
AAA_29
NPHP3_N
RecR_HhH
AAA
RsgA_GTPase
TsaE
AAA_16
AAA_28
Oxidored_nitro
HTH_IclR
DUF4926
Motif
Other DBs
NCBI-ProteinID:
AYF93110
UniProt:
A0A387B1T9
LinkDB
All DBs
Position
536514..539012
Genome browser
AA seq
832 aa
AA seq
DB search
MSLFSMDDNEGNNEENQKLFIRGKVAAVFFESNDSFFKVLLVKIVETNISDWHEDEIVIT
GNFADISEETEYVFYGQLVEHPKYGKQFKADNYHSHVPTSRDGLIEYLSGDDFPGIGKRT
AERMVDALGSNLIQDVLDNNDILDRAGLSDKQKRTVITTINKNNGMEQVIIGLNGYGFGS
NLSTAIYNKYKDETLKVIEENPYKLVEDIDGVGFKKADDIAKQMGISADNPGRIRAGLLS
ALQILSVKNGDTYTQTGPILSETLKLLNNGNAENISGDDLSDQFLELAKSQKIVGEEDRV
YLKNLYDDEWRIAEHINRIIKNPVTKKVNDKDLDSKIRLIEKKLNINYDDSQINALKQAM
KSQMFLLTGGPGTGKTTIIKGIIYLYAYLNDFSLDINSYKDSEFPILLAAPTGRAAKRMQ
ETTGIPASTIHRLLGLNGYDDSDEGTKDLEGGLLIVDEMSMVDTFLFKALVRAIPNQMKV
ILVGDKDQLPSVGPGQVFSDLLNSQRIDSMQLSTIYRQDSNSTIIPLAHNIQQGHLPADF
KQKQADRSFIPCNANQMSSVIEQIVKKAKIKGFSASDIQVLSPMYRGQSGVDHLNEVIQE
IMNPNNVDNQVDYRGIHYRLGDKVLQLVNSPEDNVFNGDIGQIVEIEHGKKSSQDKIKIA
FDQSEVTYQRRDWIQITLAYCTTIHKAQGSEFKMVILPIVPQFTKMLKKNLLYTAITRAS
DALIMIGDYNSFETCVQSESDNRNTSLKERIQSLLNGEIKPAITNSEPTITKEVAKNTSS
ESSTAPNDDKTKENKTISSNTRTTGKQDYRLTTDMIRNNEIDPMIGMEGIKP
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgttctcaatggatgataatgagggcaacaatgaagaaaatcaaaaattattc
ataagaggaaaagttgcggctgttttcttcgaaagtaatgacagcttctttaaagtactc
ttggtaaaaattgtagagactaatatctctgattggcacgaagatgaaattgttattaca
ggaaattttgctgatatttccgaagaaactgaatatgttttctatggtcagttagtagaa
catccaaaatatggaaaacaatttaaggcagataattatcatagtcatgttcctacctca
agggatggacttattgaatatttatcaggggatgactttcccggaattggtaagagaact
gctgaaagaatggtagatgctttaggtagtaacctcattcaagatgttttagataataat
gacattttggatagagcagggctttctgataagcaaaaacgaacagttattaccaccatt
aataaaaataatggaatggagcaagtaattatcgggttgaatggttacggatttggaagc
aatctatccacggccatttacaataaatacaaagatgaaacccttaaagttattgaagaa
aatccatataaattagttgaagatattgatggagtaggttttaaaaaagctgacgatatt
gcaaaacaaatgggaatttctgctgataatcctggccgaatcagagctggtttattatct
gccttacaaatattatcagtaaaaaatggtgatacttatacacaaacaggtcccattttg
agtgaaactttaaaacttttaaataatggaaatgctgaaaatatttcgggggatgacttg
tcagatcaattcctagaattggctaaaagtcaaaaaattgttggagaagaagatagagtc
taccttaagaatttatatgacgatgagtggcgcattgctgaacatatcaatcgaattata
aagaatccagttactaaaaaagttaacgataaggatttagattctaagattagattgatt
gaaaagaagttaaacattaattatgacgattcacaaattaatgctttaaaacaagctatg
aagtcacaaatgtttctattaactggtggtcctggtactggtaaaactactattattaaa
ggaattatttatttatacgcatatttaaatgatttttctttggatattaattcgtataaa
gatagtgaatttcctatcctattagcggcacctacaggtagagctgcaaagagaatgcag
gaaactactggtataccagcaagcactattcatagattgttagggttaaatggttacgat
gatagtgacgaaggaactaaagacctggaaggtggattactaattgtagatgaaatgtct
atggtagatactttcttatttaaagccttggttcgcgctattcctaatcaaatgaaagtt
attcttgtaggtgataaagaccaattaccttcagtaggtccaggacaagtattttctgat
ttattgaattcacagagaatcgatagtatgcaactaagtactatttatagacaagatagt
aattcaactattattcctttagcacataatattcaacagggacatttacctgccgatttt
aagcaaaaacaagcggatagaagctttattccatgtaatgctaaccagatgagttcagtt
attgaacaaatcgttaaaaaggcaaaaattaaaggatttagcgcttcggatattcaagtg
ctttctcctatgtatagaggacaatcaggtgttgatcatttgaatgaagtcattcaagag
attatgaatccaaataatgtggataaccaagttgattatcgaggaattcattatcgcctt
ggtgataaggtattacaactagttaatagtcctgaagataatgtttttaatggtgatatt
ggacaaattgtggaaattgagcatggtaaaaagagtagtcaagataagattaaaattgct
tttgaccaaagtgaagtaacttatcaaagacgtgattggatacaaatcactttggcatac
tgtacaaccattcataaggcacaaggtagtgaatttaagatggttattttacctattgtt
cctcaattcactaagatgttgaagaaaaacttgttgtatacagcgattacaagagctagt
gatgcattaataatgattggtgactataactcttttgaaacatgtgtacaaagtgaatct
gataatcgtaatactagtttaaaagaacgtattcaaagcttattgaatggtgaaattaaa
cctgcaattaccaattcagagccaacaataactaaagaagttgctaagaacacttctagt
gaatcttccacagctcctaacgatgataaaacaaaagaaaataaaacaattagttctaat
acaagaactactggtaaacaagattaccgtttaactaccgatatgatacgtaataatgaa
attgatccaatgattggaatggaaggaattaaaccatag
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