Apilactobacillus bombintestini: D7I45_03315
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Entry
D7I45_03315 CDS
T07159
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
abom
Apilactobacillus bombintestini
Brite
KEGG Orthology (KO) [BR:
abom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abom03032
]
D7I45_03315 (topA)
03400 DNA repair and recombination proteins [BR:
abom03400
]
D7I45_03315 (topA)
Enzymes [BR:
abom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D7I45_03315 (topA)
DNA replication proteins [BR:
abom03032
]
Prokaryotic type
DNA Topoisomerases
D7I45_03315 (topA)
DNA repair and recombination proteins [BR:
abom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D7I45_03315 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
PFam54_60
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AYF92570
UniProt:
A0A387B015
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All DBs
Position
674412..676520
Genome browser
AA seq
702 aa
AA seq
DB search
MATTKKTTTKKKRRSTKKKLVIVESPTKAKTIQKYLGRTYRVIASKGHVRDLPKSKMGVD
VEHDYAPHYISIRGKGETIKELKSEAKKARNVYLASDPDREGESIAWHLSHLLGLKSEDK
NRVAFHEITKDAVKEAFKHPREIDMNLVDAQQARRVLDRLVGYSISPLLWKKVKKGLSAG
RVQSIALWLIIKREREIKDFVPTEYWTIDADMKKDSDAFKASFYGLNGKKTELGNNDEVK
AVLDKFDKKKPFDVTNVVKKQRRRRPQPPFTTSTMQQDANVKLNFKTGKTMMVAQQLYEG
INIGKEGNQGLITYMRTDSTRISVLAKHEASELIHEKYGASYAAIKPIKGKLPEGAQDAH
EAIRPTSVKRTPASLKQYLTNDQYKLYNLIWCRFVASQMTSAVLDTMTVDMDQNGVVFRA
NGSKLNFQGFLKVYNKGKEKDNILPDLANGDQVVMTKNNPDQHFTQPPARYSEAKLIRTL
EENGVGRPSTYAPTLGTIQRRYYVKLVGRKFEPTELGEIVNSIIEEYFPDIVNIEFTADL
ENNLDEIEEAKQDWVKVVDKYFTPFEKEVKNAEKNMEDVQIKDEPAGYNCEVCGAPMVIK
MGRYGKFYACSRFPDCRNTEAIVKKIGVSCPKCKEGDVIERKSKKNRIFYGCSRYPKCDF
VTWDKPIGRNCPKDGNFLVEKKIKGGTQVICPNGDYEEDVQK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcgactactaaaaagacaacaacaaaaaagaagagacggtcgactaaaaagaagtta
gtgattgttgaatcacctactaaagcaaaaactattcaaaaatatttgggaagaacttac
cgagtaattgcaagtaaaggacatgttagagatttacctaagagtaaaatgggtgtggat
gtagaacatgattatgcaccacattacatttctattcgtggtaaaggtgaaactatcaaa
gaattaaagtctgaagcaaaaaaagctagaaatgtttaccttgcatctgaccctgataga
gaaggagaatctatcgcttggcatttgtcacatttgctaggtttaaagtcagaagataaa
aatcgtgttgctttccatgaaattactaaggatgctgtaaaagaagcatttaaacatcca
agagaaattgacatgaacttagtagatgctcaacaagctagacgtgttttagatagacta
gttggatattctatttctccattattatggaagaaagttaagaaaggtcttagtgcagga
cgtgttcaatccattgcattatggctaattattaagagagaacgtgaaattaaagatttc
gttcctactgaatactggacaatagatgctgatatgaagaaggattctgacgcatttaaa
gccagtttttacggattaaatggtaagaaaactgaattaggtaataatgatgaagttaag
gctgtattggataaatttgataagaagaagccttttgatgttactaatgttgtaaagaaa
caacgtcgtcgtagacctcaaccaccatttactacaagtacaatgcaacaagatgctaac
gttaagttgaattttaagactggtaaaactatgatggtcgcacaacaactatacgaaggt
attaatattggtaaagaaggtaaccaaggtttaattacctatatgagaactgattcaacc
agaatttcagtattagcaaagcatgaagcatctgaattaatccatgaaaaatatggtgct
agctacgctgctattaagcctataaaaggtaagttacctgaaggtgcacaagatgcgcac
gaagctattagacctacttctgtaaaacgtacaccagccagcttaaagcaatatttaact
aatgatcaatacaaattatataatttgatttggtgtagatttgttgccagccaaatgacc
tctgcagttttggatactatgactgtagatatggatcaaaatggtgtggtatttagagct
aatggttctaaattaaatttccaaggattcttgaaagtttataacaagggtaaagaaaaa
gataatatccttcctgatttagctaatggtgaccaagtggttatgactaaaaataatcct
gatcaacatttcactcaaccacctgcaagatatagtgaagctaaattaattagaacacta
gaagaaaatggagtgggtagaccatctacctatgctcctactctaggaactattcaaaga
agatattatgttaaattagtaggaagaaagtttgaacctactgaattaggtgaaatcgtt
aatagtattattgaagaatatttcccagatattgttaatattgaatttactgctgaccta
gaaaataatttagatgaaattgaagaagctaaacaagattgggttaaagtagtagataag
tacttcacaccatttgaaaaagaagtcaaaaatgctgagaaaaacatggaagacgtgcaa
attaaagatgaaccagccggatataactgtgaagtttgcggtgcacctatggttattaaa
atgggtagatatggtaaattttatgcatgttctagattccctgattgtcgaaacactgaa
gccattgttaagaaaattggtgtaagttgtcctaaatgtaaagagggagatgtaattgaa
cgtaagtccaagaagaatcgaatcttttatggttgttcaagatatccaaaatgtgacttc
gttacatgggataagccaattggtagaaactgtcctaaagacggtaatttcttagttgaa
aagaaaattaaaggtggtactcaagtcatttgtcctaacggtgattatgaggaagacgta
cagaaataa
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