Apilactobacillus bombintestini: D7I45_04380
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Entry
D7I45_04380 CDS
T07159
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
abom
Apilactobacillus bombintestini
Brite
KEGG Orthology (KO) [BR:
abom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abom03019
]
D7I45_04380
03009 Ribosome biogenesis [BR:
abom03009
]
D7I45_04380
Enzymes [BR:
abom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D7I45_04380
Messenger RNA biogenesis [BR:
abom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D7I45_04380
Ribosome biogenesis [BR:
abom03009
]
Prokaryotic type
rRNA helicases
D7I45_04380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
PrpR_N
Ferritin
HAD_2
Motif
Other DBs
NCBI-ProteinID:
AYF92755
UniProt:
A0A387AU67
LinkDB
All DBs
Position
complement(876713..878074)
Genome browser
AA seq
453 aa
AA seq
DB search
MPSTFKQYNFKPFLMDALNELHFSNPTPIQEKIIPEIRKGRSVVGQSATGSGKTHAFLLP
IFDDLNIEQLEVQAVITTPSRELAYQIYDNAKQLAKHCDKTIHIANYVGGTDKVRQIEKL
KNEQPQIVIGTPGRIADLIKSQHLKVHTANKLVIDEADMTLDLGFLNEVDSIAASFGKDL
QMMVFSATIPQKLKPFLKKYLENPYVENIPNRTIISPTIDNWLISTKGNDKNDLIYRLIT
MGEPYLVLIFANTRKRVEEIYEYLRNQGLKVGIVSGELTPRERKRMMKQIQNLDFQFVVA
TDLAARGIDIEGVSDVINDDIPDDLEYFIHRVGRTGRNNLPGTAITLYSPDEEDEIDALE
NMGISFKPKTIKNGRVVDTYDRNRRKTHRKGHDKLDPTMIGMIKKKKRNVKPGYKNKIKR
ELKRNDEMNRRISQREAGRRRRKSRKNSSQRYR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtacatttaaacaatataattttaagccattcctaatggatgccttaaacgaa
ctacatttttctaacccaacacctattcaagaaaaaataattcctgaaattagaaaggga
cgtagtgtagtaggacaatcagcaactggtagtggtaaaactcatgcttttctattacct
atttttgatgatttaaacattgaacaattagaggttcaagcagtaatcactacaccaagt
cgtgaattagcataccaaatctacgataatgctaaacaattagctaaacattgtgataaa
actattcatattgctaactatgttggtggaactgataaagtaagacaaattgaaaagttg
aaaaatgaacaaccacaaatcgttattggtactccaggaagaatcgcggatttaattaag
agtcaacatttaaaggttcatacagctaataaattagttattgatgaagctgatatgaca
ttagacttaggtttcttaaatgaagtggatagcattgcagcaagttttggaaaagaccta
caaatgatggtattctctgcaactattccacaaaaattaaagccattcttaaagaaatat
ttggaaaatccatacgtagaaaacattcctaaccgtactattatcagtccaactattgat
aattggttgatttctactaagggtaatgacaagaatgatttaatttatcgtttaattaca
atgggtgaaccatacttagttcttatttttgctaatacccgtaaacgtgttgaagaaata
tatgaatacttacgtaatcaaggattaaaagttggaattgtttctggtgaattaactcct
cgtgaacgtaagagaatgatgaagcaaattcaaaacctagattttcaatttgttgttgca
actgatttagcagctagaggaattgatattgaaggtgtatcagatgtcattaatgatgac
atacctgatgatttggaatactttattcaccgtgtaggtagaactggtcgtaataactta
ccaggaactgctattactttatattcacctgatgaagaagatgaaattgacgcattagaa
aatatgggaatttcatttaagcctaagactataaagaatggtagagttgtagatacttat
gatcgtaaccgtcgtaagactcatcgtaagggtcatgataaattagacccaacaatgatt
ggtatgattaaaaagaaaaaacgtaatgttaaacctggttacaagaacaagattaagcgt
gaattgaagagaaatgatgaaatgaatcgtcgtatttctcaacgtgaagcaggacgtaga
agaagaaagtccagaaagaatagttcacaacgctatagataa
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