KEGG   Apilactobacillus bombintestini: D7I45_04420
Entry
D7I45_04420       CDS       T07159                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
abom  Apilactobacillus bombintestini
Pathway
abom03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abom00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    D7I45_04420 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abom03019]
    D7I45_04420 (rny)
Messenger RNA biogenesis [BR:abom03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     D7I45_04420 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B EMC3_TMCO1 DUF4407 KH_2
Other DBs
NCBI-ProteinID: AYF92762
UniProt: A0A387APU8
LinkDB
Position
complement(886783..888348)
AA seq 521 aa
MTYLLPIILAIIAAFVIGILVGTVSNKKIVDKKLSKAHESAQDILEDAKRQAQTSAKEAI
LEAREKSNRYRSSIEKEIKQRRVEVQRQENRLIQREDSLDRKDDAFDKREGSLNRREEKL
NSNQKELEQKQQQADALVKQRQVELERISSLSQKEAQDLIISETKNELADERAKMVKDSY
NLARKESSENAKNLVIEAIQQSAADIVSETTVSVVNLPNDDMKGRIIGREGRNIRTFETL
TGIDLVIDDTPEAVVLSGFDPIRREVAKMALESLIKDGRIHPARIEEMVEKSRRELDEKI
QEIGEETVFDLGIHSMNPEMIMMIGKLKFKIYRGRNVLNHSIEVAKLSGVLAAELGEDVV
LAKRAGLLHEIGRSADNEIEGSHIELGVDLAKKFKESPVVIDSVSSDIDGNEPKYIISEL
VNIANKIANARPGAKSKSLESFVHRLESLEAISDSFDEVQKSYAIQAGREIRVIVKPEKV
SDTQAVVLARDIKNKIEEDMEYPGHIKVTIIREVRSIEYAK
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgacttatttattacctataatcctcgcaatcatcgctgcttttgtgattggaattctt
gtgggtacagtatctaataaaaagatagttgataagaaattatcaaaggctcacgagagt
gcacaagatattttggaagatgctaagcgacaagctcaaacttcagctaaagaagcaatt
ctggaagctagagaaaagagtaaccgttatcgttctagcattgaaaaagaaattaagcaa
agaagagttgaagtacaacgtcaagaaaatcgtttgatccaaagagaagattctttagat
cgtaaagacgacgcttttgataaacgtgaaggttctttgaatcgtagagaagaaaagctt
aattccaaccaaaaagaacttgaacaaaagcaacagcaagccgatgcgctagttaaacaa
cgtcaagtagagttagaacgtatttcttcactttcacaaaaagaagcacaagatttaatt
attagcgaaactaagaatgaattagctgatgaacgtgctaagatggtgaaggatagttat
aatctcgctcgtaaagaatcatctgaaaacgccaagaatctggtgattgaagctattcaa
caaagcgctgcagatattgtatccgaaactacagtttcagttgtaaatcttcctaatgat
gacatgaagggaagaattattggtagagaaggtagaaatattagaaccttcgaaacttta
actggaattgatttagttattgatgatactcctgaagcggttgtattgagtggatttgat
ccaattagacgtgaagttgctaagatggctttggaaagtctaattaaggatggtagaatc
catcctgctagaattgaagagatggtggaaaaaagtcgtcgagaacttgatgaaaaaatt
caagaaattggtgaagaaactgtattcgatttaggaattcattctatgaatcctgaaatg
attatgatgattggtaaattgaagtttaagatttatcgtggtcgtaatgttttgaaccat
tctattgaagttgcgaagttgtcaggagtcttagctgccgaattaggtgaagatgtcgta
ctagctaaacgcgcaggattattgcacgaaattggtcgctctgctgataatgaaattgaa
ggttcacatattgaacttggggtagatttagctaagaagtttaaagaaagccctgtagtt
attgattcagtttcatcagatattgatggaaatgaacctaaatacattatttctgagtta
gtaaatattgcaaacaagattgcaaatgctagaccaggtgcaaagagtaaatctcttgag
agctttgttcaccgattggagagcttagaagctattagtgatagctttgatgaagtccaa
aagagttatgctattcaagctggacgtgaaataagagtgattgttaaaccagaaaaagtt
tctgatactcaagcagttgttttagctagagatattaagaataagattgaagaggatatg
gaatatcctggtcatattaaggttacaattattagagaagttagatcaattgaatatgca
aaataa

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