Apilactobacillus bombintestini: D7I45_04420
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Entry
D7I45_04420 CDS
T07159
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
abom
Apilactobacillus bombintestini
Pathway
abom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D7I45_04420 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abom03019
]
D7I45_04420 (rny)
Messenger RNA biogenesis [BR:
abom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D7I45_04420 (rny)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
EMC3_TMCO1
DUF4407
KH_2
Motif
Other DBs
NCBI-ProteinID:
AYF92762
UniProt:
A0A387APU8
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Position
complement(886783..888348)
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AA seq
521 aa
AA seq
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MTYLLPIILAIIAAFVIGILVGTVSNKKIVDKKLSKAHESAQDILEDAKRQAQTSAKEAI
LEAREKSNRYRSSIEKEIKQRRVEVQRQENRLIQREDSLDRKDDAFDKREGSLNRREEKL
NSNQKELEQKQQQADALVKQRQVELERISSLSQKEAQDLIISETKNELADERAKMVKDSY
NLARKESSENAKNLVIEAIQQSAADIVSETTVSVVNLPNDDMKGRIIGREGRNIRTFETL
TGIDLVIDDTPEAVVLSGFDPIRREVAKMALESLIKDGRIHPARIEEMVEKSRRELDEKI
QEIGEETVFDLGIHSMNPEMIMMIGKLKFKIYRGRNVLNHSIEVAKLSGVLAAELGEDVV
LAKRAGLLHEIGRSADNEIEGSHIELGVDLAKKFKESPVVIDSVSSDIDGNEPKYIISEL
VNIANKIANARPGAKSKSLESFVHRLESLEAISDSFDEVQKSYAIQAGREIRVIVKPEKV
SDTQAVVLARDIKNKIEEDMEYPGHIKVTIIREVRSIEYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgacttatttattacctataatcctcgcaatcatcgctgcttttgtgattggaattctt
gtgggtacagtatctaataaaaagatagttgataagaaattatcaaaggctcacgagagt
gcacaagatattttggaagatgctaagcgacaagctcaaacttcagctaaagaagcaatt
ctggaagctagagaaaagagtaaccgttatcgttctagcattgaaaaagaaattaagcaa
agaagagttgaagtacaacgtcaagaaaatcgtttgatccaaagagaagattctttagat
cgtaaagacgacgcttttgataaacgtgaaggttctttgaatcgtagagaagaaaagctt
aattccaaccaaaaagaacttgaacaaaagcaacagcaagccgatgcgctagttaaacaa
cgtcaagtagagttagaacgtatttcttcactttcacaaaaagaagcacaagatttaatt
attagcgaaactaagaatgaattagctgatgaacgtgctaagatggtgaaggatagttat
aatctcgctcgtaaagaatcatctgaaaacgccaagaatctggtgattgaagctattcaa
caaagcgctgcagatattgtatccgaaactacagtttcagttgtaaatcttcctaatgat
gacatgaagggaagaattattggtagagaaggtagaaatattagaaccttcgaaacttta
actggaattgatttagttattgatgatactcctgaagcggttgtattgagtggatttgat
ccaattagacgtgaagttgctaagatggctttggaaagtctaattaaggatggtagaatc
catcctgctagaattgaagagatggtggaaaaaagtcgtcgagaacttgatgaaaaaatt
caagaaattggtgaagaaactgtattcgatttaggaattcattctatgaatcctgaaatg
attatgatgattggtaaattgaagtttaagatttatcgtggtcgtaatgttttgaaccat
tctattgaagttgcgaagttgtcaggagtcttagctgccgaattaggtgaagatgtcgta
ctagctaaacgcgcaggattattgcacgaaattggtcgctctgctgataatgaaattgaa
ggttcacatattgaacttggggtagatttagctaagaagtttaaagaaagccctgtagtt
attgattcagtttcatcagatattgatggaaatgaacctaaatacattatttctgagtta
gtaaatattgcaaacaagattgcaaatgctagaccaggtgcaaagagtaaatctcttgag
agctttgttcaccgattggagagcttagaagctattagtgatagctttgatgaagtccaa
aagagttatgctattcaagctggacgtgaaataagagtgattgttaaaccagaaaaagtt
tctgatactcaagcagttgttttagctagagatattaagaataagattgaagaggatatg
gaatatcctggtcatattaaggttacaattattagagaagttagatcaattgaatatgca
aaataa
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