KEGG   Apilactobacillus bombintestini: D7I45_04955
Entry
D7I45_04955       CDS       T07159                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
abom  Apilactobacillus bombintestini
Pathway
abom03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:abom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    D7I45_04955 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:abom03400]
    D7I45_04955 (uvrA)
DNA repair and recombination proteins [BR:abom03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     D7I45_04955 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      D7I45_04955 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N RsgA_GTPase AAA_29 AAA_16 nSTAND1 DnaJ_CXXCXGXG AAA_15 AAA_33 AAA_22 Viral_helicase1 nSTAND3 cobW AAA_18 AAA_23 NACHT DUF4350 RNA_helicase Mtrc-MtrF_II-IV_dom ATPase_2 MMR_HSR1 BCA_ABC_TP_C Septin Dynamin_N NTPase_1 T2SSE
Other DBs
NCBI-ProteinID: AYF92862
UniProt: A0A387AQ33
LinkDB
Position
complement(991144..994005)
AA seq 953 aa
MKNDKIVIKGARAHNLKNVNVSIPKNKLTVMTGLSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGQMDKPDVDSIEGLSPAIAIDQKTTSKNPRSTVGTVTEINDYFRLLWARVGTP
ICPNDGTKITRQSIDQMIDEVMQLPERTKLQILSPIVRDKRGQQKKVIEKIKREGFVRYR
VDGEVHEVEDDVELEKNKRHNIDIVVDRIIVKDGINSRLSDSLETALRLSGGYAVADLMG
HGDNLIFSEHYACPLCGFTVSELEPRLFSFNSPIGACPECDGLGVKLEVDESLVVPDKNK
TLNEGAIEPWNPISSKFYPSLLEQACAAFGVDMDTPFKKLPKKQRDLVLYGSNGKEFHFH
FNSSFGGVRDTDAPFEGVMNNVDRRYRETNSDFTRGQMRKFMTELTCQTCHGYRLNPEAI
SVKIDGLNISQAADLDVMKELDFFKQLHFGKKDSVIAKPILKEIIDRLTFLKNVGLDYLT
LSRSAGTLSGGESQRIRLATQIGSNLSGVLYVLDEPSIGLHQRDNDRLISSLKSMRDLGN
TLVVVEHGEDTMRSADYIVDIGPGAGANGGKIMAVGTPKEIEENDNSLTGQYLSGKKFIP
VPLKRRKGNGKKIKVTGAQENNLKNITAEIPLGEFNVVTGVSGSGKSTLINRIMKRALAQ
KMNNNSQKPGKYKSISGYKNIGKLINIDQSPIGRTPRSNPATYTGVFDDIRNLFTETNEA
KLRGYKKGRFSFNVKGGRCETCHGDGILKIEMNFLPDVYVPCEVCHGTRYNAETLEVEYK
GKNIAEVLDMTVDQALDFFSAIPKITRKLKTIDEVGLGYVKLGQSATTLSGGEAQRMKLA
AELYKKSAGNNLYILDEPTIGLHTDDIKRLLVVLHELVDQGNTVVIIEHNLDVIKTADHI
IDLGPEGGDGGGEIIATGTPEEVVKEKKSYTGQYLAEVLKRDTERTIKANKNK
NT seq 2862 nt   +upstreamnt  +downstreamnt
ttgaaaaacgacaaaattgttataaagggtgcacgagcacataatttaaaaaatgtgaat
gtttctattcctaaaaataaattaactgtaatgactggtttgtcaggatctggaaaaagt
tctttagcattcgatactttgtatgcagaaggacaaagacgttatgtagaaagtttatct
tcatatgccagacaatttttaggacaaatggataaacctgatgtagattctattgaagga
ttaagtccggcaattgctattgatcaaaagactacttccaagaatccacgttctaccgta
ggaacggttacagaaataaatgattactttagattgctatgggctagagtagggacacca
atctgtcctaatgatggaaccaagattactagacaatctattgaccaaatgattgacgaa
gttatgcaattaccagaaagaactaagttacaaattttgtcacccatagttagagacaaa
cgtggccaacaaaagaaagttattgaaaaaattaaacgtgaaggttttgtacgttaccgt
gtagatggtgaagtacatgaagtagaagatgacgtagagttggaaaaaaacaagcgtcat
aatattgatattgtggtggatagaatcatcgttaaagatggaattaattcacgactatct
gattcattagaaactgctttacgtttaagtggaggatatgcagtagctgatttaatgggt
catggagataatcttatcttctctgaacattatgcttgtccactttgtggatttacagtt
agtgaactagaacctagattgttctcatttaattcacctattggtgcatgtcctgaatgt
gatggattaggagttaagttagaagtcgatgaaagtttagtagttccagataaaaacaag
acactaaacgaaggtgccattgaaccatggaatcctatcagttcaaaattttatcctagc
ttattagaacaagcttgtgcagcatttggagtggatatggatactccttttaagaagttg
cctaagaagcaaagagacctagtattatatggatctaatggaaaagaatttcatttccat
ttcaatagtagttttggtggtgttcgtgatactgatgctccatttgaaggggttatgaat
aacgttgatcgtcgctaccgtgaaactaatagtgattttactaggggacaaatgcgtaaa
ttcatgactgaattaacttgtcaaacctgtcatggttaccgtttaaatcctgaagcaatt
agtgtaaaaattgacggattaaatattagccaagctgctgatttagacgtgatgaaagaa
ttagatttctttaagcaacttcattttggtaaaaaagattcagtaatagccaaaccaatc
ttaaaagaaatcatagatcgtcttactttcttaaagaacgtgggattagattacttaact
ttatctagatctgctggaactttatctggtggtgaatctcaaagaattcgtttagctact
caaattggatctaatttatcaggtgtattgtatgtattggatgaaccatctattggatta
caccaacgtgataatgaccgtttgatttcatcattaaaatctatgcgtgatttaggaaac
accttagttgtagtagaacatggtgaagatactatgcgctccgcagattacattgtagat
attggtccaggagctggagctaatggtggaaagataatggcagtgggtacacctaaagaa
attgaagaaaacgataattcattaactggacaatatttatctggtaagaaatttattcca
gttcctttgaaacgtcgtaaaggtaatggaaagaaaattaaagttaccggtgcgcaagaa
aacaacttgaaaaatattactgcagaaattcctttaggtgaatttaacgtagttactggt
gtttcaggttctggtaaatctacattaatcaaccgtattatgaagcgtgcattggcacaa
aagatgaataataattctcaaaagccaggtaagtacaaatctatttctggttataaaaat
attggtaagttaattaatattgatcaaagccctataggaagaactccacgtagtaatcct
gctacttatacaggtgtttttgatgatattagaaacttatttactgaaactaatgaagct
aaattacgtggatacaagaaaggcagatttagttttaatgtaaaaggtggaagatgtgaa
acttgtcatggggatggaattctaaaaattgaaatgaatttcttacctgatgtttatgta
ccttgtgaagtatgtcatggaactcgttataatgcggaaacattggaagttgaatacaaa
ggtaagaacattgctgaagtattagatatgacagttgatcaagcacttgatttcttctca
gcaattcctaaaatcactagaaagctaaaaactattgatgaagtaggattgggatatgtg
aaattaggacaatcagctactactttatctggtggtgaagcacaacgtatgaaattggct
gctgaattgtataagaaatcagccggaaataatttatatattttagatgaacctactatc
ggattacacactgatgacattaaacgtttattagtggtattgcatgaattagtagatcaa
ggtaatactgtggtaattattgaacataatttggatgtaattaaaaccgctgatcatatc
attgatttaggacccgaaggaggagacggtggtggtgaaattattgctaccggaacccct
gaagaagtggttaaggaaaagaagagttatacgggtcaatatttagcagaagtattaaaa
cgagatactgaaagaactataaaagctaataaaaataagtaa

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