Apilactobacillus bombintestini: D7I45_04955
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Entry
D7I45_04955 CDS
T07159
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
abom
Apilactobacillus bombintestini
Pathway
abom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D7I45_04955 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abom03400
]
D7I45_04955 (uvrA)
DNA repair and recombination proteins [BR:
abom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D7I45_04955 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D7I45_04955 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_16
nSTAND1
DnaJ_CXXCXGXG
AAA_15
AAA_33
AAA_22
Viral_helicase1
nSTAND3
cobW
AAA_18
AAA_23
NACHT
DUF4350
RNA_helicase
Mtrc-MtrF_II-IV_dom
ATPase_2
MMR_HSR1
BCA_ABC_TP_C
Septin
Dynamin_N
NTPase_1
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AYF92862
UniProt:
A0A387AQ33
LinkDB
All DBs
Position
complement(991144..994005)
Genome browser
AA seq
953 aa
AA seq
DB search
MKNDKIVIKGARAHNLKNVNVSIPKNKLTVMTGLSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGQMDKPDVDSIEGLSPAIAIDQKTTSKNPRSTVGTVTEINDYFRLLWARVGTP
ICPNDGTKITRQSIDQMIDEVMQLPERTKLQILSPIVRDKRGQQKKVIEKIKREGFVRYR
VDGEVHEVEDDVELEKNKRHNIDIVVDRIIVKDGINSRLSDSLETALRLSGGYAVADLMG
HGDNLIFSEHYACPLCGFTVSELEPRLFSFNSPIGACPECDGLGVKLEVDESLVVPDKNK
TLNEGAIEPWNPISSKFYPSLLEQACAAFGVDMDTPFKKLPKKQRDLVLYGSNGKEFHFH
FNSSFGGVRDTDAPFEGVMNNVDRRYRETNSDFTRGQMRKFMTELTCQTCHGYRLNPEAI
SVKIDGLNISQAADLDVMKELDFFKQLHFGKKDSVIAKPILKEIIDRLTFLKNVGLDYLT
LSRSAGTLSGGESQRIRLATQIGSNLSGVLYVLDEPSIGLHQRDNDRLISSLKSMRDLGN
TLVVVEHGEDTMRSADYIVDIGPGAGANGGKIMAVGTPKEIEENDNSLTGQYLSGKKFIP
VPLKRRKGNGKKIKVTGAQENNLKNITAEIPLGEFNVVTGVSGSGKSTLINRIMKRALAQ
KMNNNSQKPGKYKSISGYKNIGKLINIDQSPIGRTPRSNPATYTGVFDDIRNLFTETNEA
KLRGYKKGRFSFNVKGGRCETCHGDGILKIEMNFLPDVYVPCEVCHGTRYNAETLEVEYK
GKNIAEVLDMTVDQALDFFSAIPKITRKLKTIDEVGLGYVKLGQSATTLSGGEAQRMKLA
AELYKKSAGNNLYILDEPTIGLHTDDIKRLLVVLHELVDQGNTVVIIEHNLDVIKTADHI
IDLGPEGGDGGGEIIATGTPEEVVKEKKSYTGQYLAEVLKRDTERTIKANKNK
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaacgacaaaattgttataaagggtgcacgagcacataatttaaaaaatgtgaat
gtttctattcctaaaaataaattaactgtaatgactggtttgtcaggatctggaaaaagt
tctttagcattcgatactttgtatgcagaaggacaaagacgttatgtagaaagtttatct
tcatatgccagacaatttttaggacaaatggataaacctgatgtagattctattgaagga
ttaagtccggcaattgctattgatcaaaagactacttccaagaatccacgttctaccgta
ggaacggttacagaaataaatgattactttagattgctatgggctagagtagggacacca
atctgtcctaatgatggaaccaagattactagacaatctattgaccaaatgattgacgaa
gttatgcaattaccagaaagaactaagttacaaattttgtcacccatagttagagacaaa
cgtggccaacaaaagaaagttattgaaaaaattaaacgtgaaggttttgtacgttaccgt
gtagatggtgaagtacatgaagtagaagatgacgtagagttggaaaaaaacaagcgtcat
aatattgatattgtggtggatagaatcatcgttaaagatggaattaattcacgactatct
gattcattagaaactgctttacgtttaagtggaggatatgcagtagctgatttaatgggt
catggagataatcttatcttctctgaacattatgcttgtccactttgtggatttacagtt
agtgaactagaacctagattgttctcatttaattcacctattggtgcatgtcctgaatgt
gatggattaggagttaagttagaagtcgatgaaagtttagtagttccagataaaaacaag
acactaaacgaaggtgccattgaaccatggaatcctatcagttcaaaattttatcctagc
ttattagaacaagcttgtgcagcatttggagtggatatggatactccttttaagaagttg
cctaagaagcaaagagacctagtattatatggatctaatggaaaagaatttcatttccat
ttcaatagtagttttggtggtgttcgtgatactgatgctccatttgaaggggttatgaat
aacgttgatcgtcgctaccgtgaaactaatagtgattttactaggggacaaatgcgtaaa
ttcatgactgaattaacttgtcaaacctgtcatggttaccgtttaaatcctgaagcaatt
agtgtaaaaattgacggattaaatattagccaagctgctgatttagacgtgatgaaagaa
ttagatttctttaagcaacttcattttggtaaaaaagattcagtaatagccaaaccaatc
ttaaaagaaatcatagatcgtcttactttcttaaagaacgtgggattagattacttaact
ttatctagatctgctggaactttatctggtggtgaatctcaaagaattcgtttagctact
caaattggatctaatttatcaggtgtattgtatgtattggatgaaccatctattggatta
caccaacgtgataatgaccgtttgatttcatcattaaaatctatgcgtgatttaggaaac
accttagttgtagtagaacatggtgaagatactatgcgctccgcagattacattgtagat
attggtccaggagctggagctaatggtggaaagataatggcagtgggtacacctaaagaa
attgaagaaaacgataattcattaactggacaatatttatctggtaagaaatttattcca
gttcctttgaaacgtcgtaaaggtaatggaaagaaaattaaagttaccggtgcgcaagaa
aacaacttgaaaaatattactgcagaaattcctttaggtgaatttaacgtagttactggt
gtttcaggttctggtaaatctacattaatcaaccgtattatgaagcgtgcattggcacaa
aagatgaataataattctcaaaagccaggtaagtacaaatctatttctggttataaaaat
attggtaagttaattaatattgatcaaagccctataggaagaactccacgtagtaatcct
gctacttatacaggtgtttttgatgatattagaaacttatttactgaaactaatgaagct
aaattacgtggatacaagaaaggcagatttagttttaatgtaaaaggtggaagatgtgaa
acttgtcatggggatggaattctaaaaattgaaatgaatttcttacctgatgtttatgta
ccttgtgaagtatgtcatggaactcgttataatgcggaaacattggaagttgaatacaaa
ggtaagaacattgctgaagtattagatatgacagttgatcaagcacttgatttcttctca
gcaattcctaaaatcactagaaagctaaaaactattgatgaagtaggattgggatatgtg
aaattaggacaatcagctactactttatctggtggtgaagcacaacgtatgaaattggct
gctgaattgtataagaaatcagccggaaataatttatatattttagatgaacctactatc
ggattacacactgatgacattaaacgtttattagtggtattgcatgaattagtagatcaa
ggtaatactgtggtaattattgaacataatttggatgtaattaaaaccgctgatcatatc
attgatttaggacccgaaggaggagacggtggtggtgaaattattgctaccggaacccct
gaagaagtggttaaggaaaagaagagttatacgggtcaatatttagcagaagtattaaaa
cgagatactgaaagaactataaaagctaataaaaataagtaa
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