KEGG   Apilactobacillus bombintestini: D7I45_05935
Entry
D7I45_05935       CDS       T07159                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
abom  Apilactobacillus bombintestini
Pathway
abom03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abom00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    D7I45_05935 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abom03019]
    D7I45_05935 (rny)
Messenger RNA biogenesis [BR:abom03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     D7I45_05935 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD HDOD LapA_dom OppC_N UPF0154
Other DBs
NCBI-ProteinID: AYF93030
UniProt: A0A387B1K2
LinkDB
Position
complement(1239839..1241434)
AA seq 531 aa
MIGLITVLFLILGAICGYFFSNMRIKSQIDTAKRQAQHHLKKSADEYAYKAKKIIADDKQ
DVLQYQKIADDEITSQQEENNTREQRLYQHEKYLDQMKTRLLKFSQDLKSQSDEQRRVQD
DIDDVLLQAKDIWQQREEMLQNISRVDKNTAKQTVLNQTSNELSREKDIEVKYNLSESKV
AANKIANDLVIEAIQRGPRDEPRSHIERNVNVPNGDVKAKLIGKDEQHIRLLESLTGTDL
IFDEDVPLLLHIVTHDPIRREIVRNTIESLIISHHFTNSNIEYLVNITTQKVNAELRETG
ENVVHSLRVGRVHPDLMKIIGKMKYRTSYGQNVLYHSVETAQLTGALAAELGLNTQLAKR
AGLLHDIGKSIDHEVGGTHVELGVKLTQVFHEDDVVVNAIYSHHGDVEPDNPISILVATA
DAISGARPGARSESIEEYVTRLRNLEAIANRHKGVKDSYAIQAGREIRIIVNPEMLNDDR
SQQLTHCVKDQIQDELTYPGKIKVTTIRELKAVQYVGKAPKKHYRNAVKEG
NT seq 1596 nt   +upstreamnt  +downstreamnt
ttgattggattaattactgtgttatttctgattttaggagcaatttgcggatactttttc
agtaatatgcgcattaaaagccaaatagatactgctaaacgtcaagcacaacatcactta
aaaaagtcagccgatgaatatgcttataaagctaaaaagattattgctgatgacaaacaa
gatgtattgcaatatcaaaaaattgctgatgacgaaattacttctcaacaagaagaaaat
aacactcgtgaacaacgcttatatcaacacgaaaaatacttagaccaaatgaaaacacgt
ttgcttaagttttcgcaagatttaaaatcacaatccgacgaacaacgacgagtacaagat
gatatcgacgatgttttactacaagctaaagacatttggcaacaacgtgaagaaatgttg
caaaatattagtcgagtagataaaaacactgcaaaacaaacggttttaaaccaaacttcc
aatgaactaagtcgtgaaaaagatattgaagttaaatataacttgtctgaaagtaaagta
gcagctaataagattgctaatgacttagtgattgaagccattcaacgtggaccacgtgat
gaaccacgtagtcatattgaacgcaacgttaacgttcctaatggtgatgttaaagcaaag
ttgattggaaaagacgaacaacatattcgtttgctagaatccttgaccggtaccgattta
atctttgacgaagatgttccattgttgttacacatcgtaacgcatgatccgattagaaga
gaaatcgtccgaaacacgattgaaagcttaattatttcgcatcactttactaacagcaat
attgaatatttagttaatattactacccaaaaagttaacgccgaattgcgtgaaacaggg
gaaaacgtagtacattctctacgcgtaggacgtgtacatcctgacctaatgaaaattatc
ggtaagatgaaataccgtactagttatggtcaaaacgtgctatatcactcggtagaaact
gcgcaattaactggtgctttagctgctgaattaggtttaaatacccaattagctaagcgg
gctggtttacttcatgatattggtaaatccattgaccatgaagtcggtggtacccacgtg
gaattaggggttaaattaactcaagtattccacgaagatgacgtagtggtaaatgcgatt
tattctcaccatggggatgtggaacctgataatcctatctctattttggtagctacggct
gatgccatttcaggtgctcgtccaggagctagaagtgaatcgattgaagaatatgtcact
cgtcttcgtaacttggaagctatagctaaccgccataaaggtgttaaagatagttacgct
attcaagccggaagagaaattagaatcattgttaacccagaaatgttaaatgatgatcga
agccaacaattaacccactgtgttaaagaccaaattcaagatgaattaacttacccagga
aagattaaggtaactactattcgtgaattaaaggccgttcaatatgtgggaaaagcacct
aagaaacattatcgcaatgctgtaaaagaaggctaa

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