Acinetobacter bouvetii: ACBO_05280
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Entry
ACBO_05280 CDS
T07603
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
abou
Acinetobacter bouvetii
Brite
KEGG Orthology (KO) [BR:
abou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abou03009
]
ACBO_05280 (rlmD)
Enzymes [BR:
abou01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ACBO_05280 (rlmD)
Ribosome biogenesis [BR:
abou03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACBO_05280 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
PCMT
Methyltransf_25
Ubie_methyltran
MTS
TRM5-TYW2_MTfase
TRAM
Methyltr_RsmB-F
Cons_hypoth95
Methyltransf_11
Methyltransf_23
GCD14
CMAS
FtsJ
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
BCU63737
LinkDB
All DBs
Position
571306..572712
Genome browser
AA seq
468 aa
AA seq
DB search
MKHRAKPAKAQQPSYIFQVESLSHEGRGIAHYGTHPDHPADKHGKKVFIRYALPGETVCA
RITYTAKRLEEADSIELLSDASEMRVTPACPHFGGCGGCSMQHIHPDEQIRLKQDVLKSH
LSHFAGLQSEEWLAPLRSSREDYRRKARIGVRYLPNKDKLIVGFRENASNQLTSIDRCLV
LDQNFGSVTRLKQLIQSLKGKGAVGHIELAMGDQDVALVIRHTEKLNDEDVNQLQQFALQ
KGWQLYLQPAGPGSLARIDGQSSDMRLHYRLEEFNADFAFNPLDFTQVNSTINPQMVKLA
CDLLELKQGERVLDLFCGLGNFSLPLARCVGAQGEVIAVEGSEEMVHRGAENAVNNGIDW
LKFYSQDLTKDFSHHSWAKEGFDALLIDPPRSGAEEIMHYVPKFGAKRIVYVSCNPATLA
RDAGILAQQGYLLKKAGVMDMFTHTGHVESIALFEQENKPNDLSYNEE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatagagccaagcccgcaaaagcccagcagccttcttatatcttccaggttgag
tcgctttcacatgaggggcggggcatcgcgcattatgggacccatcctgaccatcctgcg
gataaacacggtaaaaaagtttttatccgttatgccttgccgggagaaactgtatgcgcg
cgcattacctacacagcgaaacggctggaagaagctgacagcattgaattgctgagtgac
gcgtctgaaatgcgcgtgacgcccgcatgcccgcattttggcggctgcggcggctgcagc
atgcagcatattcatccggatgagcagatccgcttaaaacaggatgtgctgaaatcgcat
ttaagccattttgcaggattgcagtccgaagaatggctggcgcctttgcgctcttcacgt
gaagattaccgccgtaaagcgcggattggcgtgcgctatttgccgaataaggacaaactg
attgttggattccgggaaaatgccagcaatcagctgacgtcaattgaccgatgtttggtg
ctggatcaaaacttcggttcggttacgcggctgaagcagttaatccaaagtctaaaaggc
aagggtgcggttggtcatatagaattggcgatgggtgatcaggatgttgccttggtgata
cgccatactgaaaaattaaatgatgaggatgtcaaccaattacagcaatttgcgttacag
aagggttggcaattgtatttgcagcctgcaggtccaggcagtttagcccgcattgatggc
cagagctcagacatgcgcctgcattaccgtttggaagagtttaatgcagattttgcgttc
aatcctttagattttacgcaggtgaactctacaattaatccgcaaatggtcaagctggca
tgtgatttgcttgaattgaagcaaggcgagcgtgttctggatttattttgcggattagga
aatttttctcttccgcttgcgcgctgtgttggtgcgcaaggtgaggtcattgcggttgaa
ggcagtgaggaaatggttcaccgcggtgcagaaaatgctgtaaataatggcattgattgg
ctgaagttctattcacaagatttaacaaaagacttttcgcatcattcttgggcaaaagag
ggttttgatgcattattgattgatccgccgcgttcaggcgcagaagaaattatgcattat
gtgcccaaatttggtgcaaaaagaattgtttatgtttcatgcaatccagcgactttggct
agagatgcaggaatattggcgcagcaaggctatctgctgaaaaaagcaggcgtgatggat
atgtttactcataccggtcatgttgaatcgattgctttgttcgaacaagaaaataagccg
aatgatttaagttataatgaagagtaa
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integrated database retrieval system
