Acinetobacter bouvetii: ACBO_14240
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Entry
ACBO_14240 CDS
T07603
Symbol
mfd
Name
(GenBank) transcription-repair-coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
abou
Acinetobacter bouvetii
Pathway
abou03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACBO_14240 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abou03400
]
ACBO_14240 (mfd)
Enzymes [BR:
abou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACBO_14240 (mfd)
DNA repair and recombination proteins [BR:
abou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
ACBO_14240 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
DEAD
UvrB_inter
Helicase_C
CarD_TRCF_RID
ResIII
MFD_D3
SNF2-rel_dom
ERCC3_RAD25_C
Glyco_tran_WecG
RecG_dom3_C
UB2H
Motif
Other DBs
NCBI-ProteinID:
BCU64633
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All DBs
Position
1557721..1561179
Genome browser
AA seq
1152 aa
AA seq
DB search
MFQQEISQLKLGQLKAGEKRWIGNLQGSAAGLLFKEIAAQNKQLFVIVARNSQHLGQLES
ELEFYGIKPTIFPDWEILPYDRLSPHQDIVSERLAILSNMPKSGVLLISASTLAQRIAPA
SWVLGEHFDIKVGQKFDLEQQKLKLIQAGYHLVDTVYDHGEFAVRGSIMDIYASGQSAPI
RIDLFDDEIETLKFFDPETQRTSETLQNFTVLPAKEFPLKEGRAVFRDRYADMFPAANPK
KNPIYQDVLEGIASPGLEFYLPLFFSAEAMQSQSTLMAYLPKNGIVITDKDVDEGLTQFW
KEAVRRYEDRRHNVDHPILAPEHLFMQPSQVLEQLNLFGRVIASSECFEEKPGVLNIESE
LPPRLPVDPKREKPFAEVKNYIDRSGHPVLLVAESAGRRETLKDALRPSLGDIPYVSNFN
DFIESMQAVAITNAPLERGLLLPGKITVISENQLYEHRVVQRRRKRQQDVSEEFLIRSLT
ELSLGAPVVHIDYGVGRYAGLVTLSIDDQDHEFLQLDYADAAKVYVPVTNLHLISRYSGG
DPDLAPLHKLGTDAWNKAKRKALEQIHDVAAELLHIQARRQSKPGFGFELDHSLYMQFAS
GFAYEETLDQANAIEATLHDMQLAKPMDRLVCGDVGFGKTEVAMRAAFVAVQNNKQVAVL
VPTTLLAQQHYESFKDRFADWPVRIEVLSRFGTSKSHTKTIEDLAEGKVDIVIGTHKILQ
ENVQFKNLGLMIVDEEHRFGVRDKERIKALRADVDMLTLTATPIPRTLNMAFSGMRDLSI
IATPPARRLAVKTFVQEHTAESIKEAILRELLRGGQVYFLHNEVDTIERTAENIRDLVPE
ARVAVAHGQMRERELEQVMQQFYHKEYNVLVCSTIIETGIDVPNANTILIERADKLGLAQ
LHQLRGRVGRSHHQAYAYLLVPSIKGLKGDAEKRLDAISRASNLGAGFMLATEDLEIRGA
GELLGEQQSGSMQAIGYSLYMEMLEKATKAIQKGKAPNFDAPLSLTAEITLHMPALIPDE
YLGDVHQRLLFYKRISNTDSTDKLDNIRMELIDRFGVPPQPVKQLFAVHQIRLKAEQLGI
TKIDISSHGGHLEFSPDTPVQAISIIQMMQKHPTFFRMEGGQRLKVMVMLEDYEKRIQFL
NDLLDNLMKELH
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgttccaacaagaaatatcacaactgaaacttggccagctcaaggctggtgaaaagcgc
tggattggcaatttgcaaggctcagcggctggtctgctgtttaaagaaattgcagcgcag
aataagcagctgtttgtcattgtcgcccgcaacagccagcatctaggccagttggaaagt
gagctggaattttacggaataaagcccacaatttttccggattgggaaattttgccttat
gaccgcctgtcaccgcatcaggatattgtgtcggaacgtttggcaattttatcaaatatg
ccgaaatcaggcgtgctgctgatttctgcgtctactttagcgcagcgcattgcgccggct
tcatgggtgctgggtgaacattttgatattaaagtcggacagaaatttgatttagaacag
caaaaactcaaactgattcaagcgggctatcatctggtcgatacggtatatgatcatgga
gaatttgcggtacgcggcagcatcatggatatctatgcctcaggtcaatccgcgcctata
cgcatagacttgtttgatgatgaaattgaaactctgaaattttttgatcctgaaacgcaa
cgcacttcagaaacactgcaaaattttacggtgcttccggctaaagaatttccattaaaa
gaaggccgggctgtattccgcgaccgctatgcggatatgtttccagcagctaatccaaag
aaaaatccaatttatcaggatgttttagaaggcattgcatctcctgggctagagttttat
ctgcctttgtttttcagcgctgaagcgatgcaaagccaaagtacgctgatggcgtactta
cccaagaatggcattgtcattacagataaagacgtagatgagggtttgacccagttttgg
aaagaagctgtgcgccgttatgaagaccgccggcataatgttgaccatccgattttagcg
ccagaacatctgtttatgcagccgagtcaagtgctggagcagttgaatctttttggccgg
gtgattgcatcaagtgaatgctttgaagaaaaaccgggtgtgctgaatattgagtcggag
ttgccgcctaggctacctgtggatccaaagcgggaaaagccatttgccgaagttaaaaat
tatatagaccgcagcggccacccagtgctgctggttgcagaaagcgccggccggcgtgaa
acattgaaagatgctttgcgtccgtctttaggtgatattccgtacgtctcgaattttaat
gattttatcgaatcaatgcaggctgttgccattaccaatgcgcctttagagcgcggttta
ttgctgcccggcaagattaccgtcatttcagaaaatcagctgtatgaacaccgtgtggtg
cagcgccgccgcaaacgtcagcaggatgtttccgaagagtttttaatccgcagcttaacc
gagctgagcctgggcgctcccgtcgtgcatatcgattatggtgtaggccgttatgccggg
ttagtcaccttaagcattgatgatcaggatcatgagtttttacagctggattatgcagat
gccgccaaggtttatgtgccggtgaccaacttgcatctgatcagccgttacagcggcggt
gatcctgatttagcgcctttgcataagctgggtacagatgcctggaataaagcaaaacgc
aaagccctggagcagatccatgatgtggccgcagagcttttgcatattcaggcgcgccgc
cagtctaagccgggttttggatttgagctggatcatagtctatatatgcagtttgccagc
ggttttgcatatgaagagacattggatcaggccaatgcaattgaagccacgctgcatgac
atgcagttagccaaaccgatggaccgtttagtctgcggtgatgtcggttttggcaaaaca
gaagtggcaatgcgggcggcctttgttgccgtgcaaaataacaagcaggttgccgttctg
gtgccaacaaccttattggcacagcagcattacgaatcatttaaagaccgttttgccgat
tggccggtacggatcgaggtgttatcgcgttttggcacatccaagtcacatacgaaaacg
attgaagatttggctgaaggcaaagtggatattgtgattggcacacataagatcctgcag
gaaaatgtgcagttcaaaaatctgggactgatgattgttgatgaagagcaccgctttggc
gtgcgtgacaaagagcggatcaaagccctgcgcgcagatgtggatatgctgacgttgacc
gcaaccccaattccgaggacgctgaatatggctttcagcggcatgcgggatttatcgatt
attgcgacgccgcccgcccgccgtttagctgtaaaaacttttgtgcaggaacatacggct
gaatctattaaagaagcgattcttcgtgaattgctccgcggcggtcaggtgtatttcctg
cacaatgaagtagacaccatagagcgcacagccgagaatattcgagacttggtgccggaa
gcgcgtgtagccgtagcgcatggccagatgcgcgagcgtgagctggaacaggtcatgcag
cagttctaccataaagaatacaatgtgctggtgtgttcaaccatcattgaaacaggcatt
gatgtgccaaatgccaacaccatattgattgaacgggcggataagctgggtttggcacag
ctgcatcaattgcgcggacgggttggccggtctcatcatcaagcttatgcctacttgctt
gtaccgtcgataaaaggcttaaaaggcgatgcggagaaacgccttgatgcgatcagccgt
gcgtcaaacctaggcgcgggcttcatgctggcgacagaagatttggaaatccgcggcgca
ggtgaactgctgggtgaacagcaaagcggttcgatgcaggccattggatacagcctgtat
atggagatgcttgaaaaagccacaaaggccattcaaaagggcaaagccccgaatttcgat
gcgccattgtcattgactgcagaaattactttgcatatgcccgctttaattccagatgaa
tatttgggtgatgtgcatcagcgcctgctgttctataaacgtatcagcaatacagacagc
acagacaaattggataatatccggatggagctgatcgaccgttttggtgtgccgccgcag
ccggtcaaacagctgttcgctgtgcatcaaatccgcctcaaagcagaacagctgggcatt
actaaaattgatatcagcagtcatggcgggcacttagagttttcaccggatactcctgtg
caggctataagcattattcaaatgatgcagaaacatccgaccttttttagaatggaaggc
gggcagcgcttaaaagtcatggtgatgctggaagattatgaaaagcgcatacagtttttg
aatgatctgctggataatttaatgaaagaattgcattga
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integrated database retrieval system
