KEGG   Acinetobacter bouvetii: ACBO_22210
Entry
ACBO_22210        CDS       T07603                                 
Symbol
dnaQ
Name
(GenBank) ribonuclease H
  KO
K14159  ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7]
Organism
abou  Acinetobacter bouvetii
Pathway
abou03030  DNA replication
abou03430  Mismatch repair
abou03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:abou00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ACBO_22210 (dnaQ)
   03430 Mismatch repair
    ACBO_22210 (dnaQ)
   03440 Homologous recombination
    ACBO_22210 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abou03032]
    ACBO_22210 (dnaQ)
   03400 DNA repair and recombination proteins [BR:abou03400]
    ACBO_22210 (dnaQ)
Enzymes [BR:abou01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ACBO_22210 (dnaQ)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     ACBO_22210 (dnaQ)
DNA replication proteins [BR:abou03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ACBO_22210 (dnaQ)
    RNase H
     ACBO_22210 (dnaQ)
DNA repair and recombination proteins [BR:abou03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ACBO_22210 (dnaQ)
SSDB
Motif
Pfam: RNase_H RNase_T DNA_pol_A_exo1 ATG29_N
Other DBs
NCBI-ProteinID: BCU65430
LinkDB
Position
2427633..2429039
AA seq 468 aa
MSQTITLYVDGACKGNPGLGGWGAYIITESAEHKICGGEAETTNNRMELTAAIEGVLFCP
MDAKLIIWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWKKLDAVCQGREIEWNWIKGHA
GHAGNEMADQLANQGAEETAAQLKNGNAVETKKKAESDWLLNDPFGLDASDDEEEYSEDE
MHDAESTDAAGDAPINTWAEDALDEAVPADASRIPAKQASNAPIHPAVVITPATLDLQGP
RQLILDTETTGFYFQDSDRIIEVGAIEMINRKLTGSSIHIYINPQKPVGESENIHGISDD
FLKDKPLYAEIAEALYEYLKGAEIIAHNATFDMNFLNMEFTRAGFGALSNVCEVTDTLSM
AKAKHPGQKNSLDALVRRYEIPQRDRTFHGALLDAEILSDVYLAMTGGQVSFDIDALTHS
ESAQGNASRQAVQIELPAIMPSEEELAEHENWVKQFEEKHGTPCLFAK
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgtcacaaacaatcacgctttatgtcgatggcgcctgcaagggcaatcccggtttaggc
ggatggggtgcatacattattacagaatctgcagagcataaaatttgcggcggcgaagcg
gaaaccaccaataaccgcatggagctgactgcagcgattgaaggtgtgctgttttgccca
atggatgccaaactgatcatttggacagattccaactatgtcaagcaaggcattacagaa
tggattcacggctggaaaaagaaaaactggaaagatgtcaaaaatcctgacctttggaaa
aaactggatgctgtatgccaaggccgtgagattgagtggaactggattaaaggccatgca
ggccacgccggcaatgaaatggcggatcagttggccaaccaaggcgcagaagaaaccgca
gcccagttaaaaaacggcaatgccgtcgaaactaaaaaaaaagcggaatctgactggctc
ttgaatgatccttttggattggatgcctcggatgacgaagaagaatattccgaagatgaa
atgcacgatgcggaatcaacggacgcagcgggtgatgcgccgatcaacacatgggctgaa
gatgcgctggacgaggctgttcctgcagacgcaagcagaattcctgcaaagcaggcatca
aacgcgccgattcatcctgcagtcgtcattacacccgccacattggacctgcaaggcccg
cgccagctgattctggataccgaaaccaccggtttttatttccaggacagcgaccgcatt
attgaagtcggcgcaatcgaaatgattaaccgcaagctgaccggcagttccattcatatt
tatatcaacccgcaaaagcctgtgggcgaatctgaaaatattcacggcatcagcgatgac
tttttaaaagacaagccgctgtatgcagaaattgccgaggctttatacgagtacttaaaa
ggtgcagaaattattgcgcataacgcaaccttcgatatgaacttcttaaatatggagttc
acccgcgccggctttggcgcgctgtcgaatgtctgcgaagtgaccgatacgttaagcatg
gcaaaagccaagcaccctgggcaaaaaaactcgctggatgcgctggttcgccgctatgaa
attccgcagcgtgaccgtactttccacggcgccttgctggatgcggaaatcctgtccgat
gtttatttagccatgactggcgggcaggtttcatttgacatcgacgccctgactcattct
gaaagcgctcaaggcaatgcgtccagacaggctgtgcaaattgagctgcctgccattatg
ccaagcgaagaggaattagctgagcatgagaattgggtcaaacaatttgaagaaaaacat
ggaacaccttgccttttcgcaaaataa

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