Acinetobacter bouvetii: ACBO_27790
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Entry
ACBO_27790 CDS
T07603
Symbol
rne
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
abou
Acinetobacter bouvetii
Pathway
abou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACBO_27790 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abou03019
]
ACBO_27790 (rne)
03009 Ribosome biogenesis [BR:
abou03009
]
ACBO_27790 (rne)
Enzymes [BR:
abou01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ACBO_27790 (rne)
Messenger RNA biogenesis [BR:
abou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACBO_27790 (rne)
Ribosome biogenesis [BR:
abou03009
]
Prokaryotic type
rRNA processing factors
ACBO_27790 (rne)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
HUA1_small
Motif
Other DBs
NCBI-ProteinID:
BCU65988
LinkDB
All DBs
Position
3038551..3041838
Genome browser
AA seq
1095 aa
AA seq
DB search
MKRMLINATHAEEIRVALVTGQRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GAGRQGFLSMREIANSYFKADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGSVRDELKEMLASLSVPRGMSVIVRTAGIGRSQEELQL
DLQHLLDLWAQIQSTASAGPSPMLVHQEAGVVTRAIRDYLRDDVAEILIDSEQAYNEAYN
FVKAVMPRQIDKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGHDVEETALNTNLEAAEEIARQLRLRDIGGLVVIDFIDMTKDRNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALRERHGEVQVEVPVEIAAFLLNEKRHSLVYLEQTSNVRVTVLPHPHLETPHY
EISYNPEGFAPTSYERTEATRSSEKELGYEAAEWHLEGEQPAQAPAQPQDKAQKKQRHAA
QQQPAVQAVPAQASASPCAWLENLFVQKQAATIDQSRTANNAAAAIEQMVNGGAVSRGQM
GQVSAAPAPAAIVPANNAYLTPSTVAQKADGRDADKPAEKDEKAPRHNNGNKKPQRNKHK
EPREQAPQENAAHQVHEEIVQVSRQEQRQEARDNKRNSRRQHSNEQQQDVQNNEQQPQNS
VPRRDRNSQRPNRPNRNRDQSVLNEQAAAPQEAAAEHAAPSRQPKVETIDAPHQDIMPTA
LVVNVDQAQSEIIALAAEVQPAAETAKPEKAAKAPAPHKEKAPAEAAPAKQQEKHAEHKP
RQEQVQRASNDPRQRRRQQREGQVRQAAAPKIAPSQVPTLGQYTVGSLISHVYGADCSVL
IEQFGLIPTFNRALQKFTEEYAATLTAPAAAPTEKKPVTRDVAIAKAAPEAEPAAVLDLI
PPKPASESRVANDPRERRRLAKQALEQAKQTHAEEPVKAEAAVEPAAEAAAPVQESKPAV
QAEAAPEPVQAELAVAVEDVKAEAPAETEHVQAEAQNLENTETSEAEEAKAEKDKPVRPR
RPRGRPPKKANTAAE
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatgttgattaatgcaacacatgcagaagagattcgcgttgcacttgtcact
ggtcagcgtctttacgatttcgacttagagaatcgtacccgtgagcaaaaaaaatcaaat
atctataaaggtcacgtgactcgcgtagagccttctttagaagctgtctttgtagaatat
ggcgcaggccgccaaggcttcctgtctatgcgggaaattgccaattcatatttcaaagcc
gatcctcgccaaacgtctaatatccgtgaattgatcactgaaggcacagagcttttggtt
caagtggaaaaagaagaacgcggcaataaaggcgcggctttatctacatttatatcactg
gccggccgttatttagttttaatgccaaacaacccgaaaggcggcggcatcagccgtcag
atttcaggttcagtccgtgacgaattgaaagaaatgctggcctctttaagcgtgccgcgc
ggcatgagcgtgattgtgcgtactgcaggcattggccgttctcaagaagaactgcagctg
gatctgcagcacttgctggatctttgggcgcaaatccaaagcactgcaagcgctggcccg
tctccaatgctggttcatcaggaagctggcgtagtcactcgcgcaatccgcgattacctg
cgtgacgatgttgctgaaatcttaattgactcagaacaagcgtataacgaagcgtacaac
tttgttaaagctgtgatgccgcgtcaaattgacaagctgaaaacctatactttaaatgag
cctttgtttgctcactttggtattgaaagccaaattcaaactgcgtatgaacgtgaagta
aaacttccttctggcggctcaatcgtcatcgaccaaaccgaagctttggtttctatcgat
atcaactctgcaaaatctacccgtggtcatgacgttgaagaaacagcgctcaacaccaac
ttagaagcagccgaagaaattgcccgtcaattgcgtttacgcgacatcggcggcttagtt
gtaatcgactttatcgacatgaccaaagaccgcaaccagcgcatggttgaagcgaaactt
cgcgaagcaacgcaaagcgaccgcgcacgcatccaattcggtcaattatctcgcttcggc
ttgatggaaatgagccgtcagcgcctgcgtccttctcttgaagaagcgactggttatgtt
tgcccgcgctgccacggtacaggcatggtgcgtgacctgcgctcactttcactttcaatt
atgcgtaaagtggaagagattgccctgcgtgaacgtcatggtgaagttcaggttgaagtg
ccagttgaaattgctgcgttcttactcaatgaaaagcgccacagcctggtttacctcgag
caaacctctaatgttcgtgtgactgtattgccgcatccgcatttagaaacgccgcactac
gaaatttcgtataacccggaaggctttgcgccgacaagttacgagcgtacagaagccacc
cgctctagcgaaaaagaattaggctatgaagccgctgaatggcatttagagggtgagcag
cctgctcaagcgcctgctcagccgcaagacaaagctcagaaaaagcaaaggcatgcagca
cagcagcagccagcagttcaggctgtgcctgcacaagcctctgccagcccatgtgcttgg
ctggaaaatctgtttgttcaaaaacaggcagcaacaattgaccaatcacgcactgccaac
aatgcagctgcagccattgaacaaatggtgaatggcggcgcagtaagccgcggtcaaatg
ggtcaagtttcagcagcgccagcgcctgctgccattgttcctgcgaacaatgcttatttg
acaccatcgactgtagcgcaaaaagcagatggccgtgatgcggacaaacctgctgaaaaa
gacgaaaaagcgccgcgccacaacaacggcaataaaaagccgcagcgcaacaagcacaaa
gagcctcgcgaacaagcgcctcaagaaaatgccgcacatcaagtgcacgaggaaattgtt
caagtctctcgccaagagcagcgtcaggaagcgcgtgacaacaaacgcaattctcgccgc
cagcacagcaatgagcagcagcaggatgttcaaaacaatgagcagcagccgcaaaatagc
gtaccgcgccgtgaccgcaacagccagcgtccaaaccgcccgaaccgcaaccgcgaccaa
agcgtattgaacgaacaggctgcagcaccgcaagaagccgcagctgaacacgctgcccct
tcccgccagcctaaagttgaaaccatcgatgcgccgcaccaggacatcatgccgacagca
ttggtggtgaatgttgatcaggcgcaaagtgagattatcgctcttgcggctgaagtgcag
ccagcagcagaaaccgctaaacctgaaaaagcagctaaagcgcctgcgcctcataaagag
aaagcgcctgctgaagcggctccagctaagcagcaagagaagcacgcagaacacaagcct
cgccaagagcaggttcagcgcgccagcaatgatccgcgccagcgccgccgccagcagcgt
gaaggccaagtccgtcaagccgcagcgccaaaaattgcgccgtcgcaagtgcctacattg
ggccaatacactgtcggcagcctgatcagccatgtgtatggtgctgactgttcggtgctg
attgagcagtttggcttaattccaacattcaaccgcgctctgcaaaagttcacggaagaa
tatgcagcaacgctgaccgctccagcagcggcgcctactgagaaaaagccggtaacgcgt
gatgtggcaattgcaaaagccgcgcctgaagctgaacctgctgctgtgctggacttgatc
ccgccaaaacctgcgtctgaaagccgggttgccaatgacccgcgcgaacgccgccgtttg
gccaagcaagcgctggaacaggcaaaacaaacgcatgccgaagagccggtaaaagctgaa
gctgctgttgaacctgctgcagaagcagcggcgcctgtacaagaaagcaaaccggcagtt
caagccgaagccgctcctgaacctgttcaagccgaactggctgtagctgtagaagacgtg
aaagctgaagcgccagctgaaactgaacacgtgcaagcagaagctcaaaatcttgaaaat
acagaaacttctgaagctgaagaggctaaagcggaaaaggacaagccagttcgtccacgc
cgtccgcgcggccgtccgccaaagaaagcaaacaccgcagcagagtaa
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