Acinetobacter bouvetii: ACBO_28580
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Entry
ACBO_28580 CDS
T07603
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
abou
Acinetobacter bouvetii
Pathway
abou03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abou00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACBO_28580 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abou03021
]
ACBO_28580 (rpoC)
03400 DNA repair and recombination proteins [BR:
abou03400
]
ACBO_28580 (rpoC)
Enzymes [BR:
abou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACBO_28580 (rpoC)
Transcription machinery [BR:
abou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACBO_28580 (rpoC)
DNA repair and recombination proteins [BR:
abou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACBO_28580 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
BCU66067
LinkDB
All DBs
Position
complement(3130403..3134605)
Genome browser
AA seq
1400 aa
AA seq
DB search
MKDLLDIMRKKTDSDGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPFEKYQLLNDEEYFNALEEHGDE
FTAKMGAEAVQDLLKDIDLEAEISRLREEIPNTTSETKLKKASKRLKLMEAFKESNNKPE
WMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPSLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLAHV
IRQHPIMLNRAPTLHRLGLQAFEPTLIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAINAKGEGMVFADTDEVNR
ALATGQVDLHARVKARVHQTVIDENGNREHQTIVVDTTPGRCLLWEVVPEGMDFQQINVE
MTKKNISKIINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPQKQAIID
KAETEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSFTTVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTFDGLVMTPFIQGGDVIENL
GARVLGRVVAEDVKKVGSEEVLLARNTLIDEKLATFIENAGIDEIKVRSVVNCASTFGVC
AKCYGRDLARGHQVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSIQVRNK
GTVRFHNVKTVQHAKGHLVSTSRSGEIGIADDLGRERERYKIPYGASIILKDGEEVAAGG
IVATWDPHTHPLVTEVAGKVRFSQIADGVTVTSKTDDATGMTTIEILPVTSRPASGKDLR
PAVVLDTVDGGEQFYFLPQNTILSVRNGETIGVGDVIGRVPQETSRTRDITGGLPRVADL
FEARKPKEHAILAEISGVVSFGKETKGKNRLVITPDDGSEIYEELIPKWRTINVFEGEHV
NRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKV
DITDGGDTSFIKGEQVDYIRVVGENQAVLAQNKFPAKFERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEQELHND
FSDVDQALSQAFSQEFNNGL
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctcgatatcatgcgcaaaaagacggattcagacggccacgctccagta
gagtttgaccgcatccgtattggtcttgcgtcaccagaaatgattaagtcatggtctcac
ggtgaagttaaaaagcctgagacaatcaactaccgtacgttcaagccagagcgtgacggt
ttgttctgtgccaaaatctttggtccagtaaaagattacgaatgcttgtgcggtaaatac
aagcgtatgaaatacaaaggcgtcatttgtgaaaaatgtggcgttgaagtaacaacagcg
aaagttcgccgtgaacgtatgggtcacattgagcttgcttctccagttgcacacatctgg
ttcttaaaatcacttccgagccgtatcggtcttcttttagacatgacactgcgtgatatc
gaacgtgtattgtatttcgaatcttatgttgtaactgaccctggtatgactccatttgag
aaataccagcttcttaacgatgaagaatacttcaatgcgttagaagagcacggtgatgaa
ttcacagcgaaaatgggtgcggaagctgttcaggacttgttgaaagacatcgatcttgaa
gctgaaatttctcgcctgcgcgaagaaattccgaacacaacttcagaaacgaagcttaaa
aaagcgtctaaacgtctgaaattgatggaagcattcaaagagtcaaacaacaagccagaa
tggatggtgatgaacgtacttccagtacttccaccagatcttcgtccgcttgtaccgctt
gaaggcggtcgtttcgcgacttctgatttgaacgacctttaccgccgtgtgattaaccgt
aacaaccgtttgaagcgtcttcttgaccttgcagcgccagatatcatcgtacgtaatgaa
aaacgtatgcttcaagagtctgtagatgcattgctggataacggccgtcgcggtcgtgca
attacgggctcgaataaacgtccgcttaaatctttggcagacatgatcaaaggtaagcaa
ggccgtttccgtcaaaacttacttggtaagcgtgttgactattctggccgttcggtaatt
actgtaggtccatcactgcgtttgcaccaatgcggtcttccgaaaaaaatggcgcttgaa
ttattcaagccattcatttttgctaaattgcaggcatctggccaagcgacaaccattaaa
gctgcgaagaaaatggttgaacgcgaaactccagaagtttgggacgttcttgctcacgta
atccgtcagcacccaatcatgctgaaccgtgcgccgacacttcaccgtttgggtcttcaa
gcatttgaaccgaccctgattgaaggtaaagcgatccgtcttcacccgttagtctgtgcg
gcatttaacgccgactttgacggtgaccaaatggcggtgcacgtgccattaacgcttgaa
gcgcagttagaagcgcgtgcgttgatgatgtcgaccaacaacatcttgtctccagcgaac
ggtgagccaatcatcgtaccgtcacaggacgttgtcttgggcttgtattacatcacgcgt
gatgcaatcaatgccaaaggtgaaggcatggtgtttgcggatactgacgaagtaaaccgc
gcgcttgcaacaggccaagttgatttgcacgcccgcgttaaagcgcgtgtacatcaaacg
gtgattgatgaaaatggtaaccgtgagcatcaaaccattgttgtagatacaacacctggc
cgctgcttgctttgggaagttgtgcctgaaggtatggacttccagcaaattaatgttgag
atgacgaaaaagaacatctctaaaatcattaactcttgctaccgtaaactgggcttgaaa
gatacggttatctttgctgaccaattgatgtatttgggcttccgtcaagcgacacgttca
ggtgtgtctgtcggtatggaagacatgctgattccaccgcaaaaacaagccattattgac
aaagctgaaactgaagttcgtgaaattgaacagcagtttgaacaaggcttcgtaactgcg
ggcgaacgttacaacaaagtggtcgatatttgggcgcgtaccaacgaccaagttgcgaaa
gcgatgatggacaacttgtcattcacgactgttaaaaacaagcagggtgaagatgagaag
caaaaatcattcaactcaatctatatgatgtctgactcgggtgcccgtggttcggcagcg
cagattcgtcagttggcgggtatgcgtggtttgatggcgaaaccggatggctcgatcatt
gaaaccccaattaaagccaacttccgtgaaggtttgaccgtacttcagtacttcatttca
acgcacggtgcgcgtaaaggtttggccgatacagcactgaaaacagcaaactcgggttac
ttaacgcgccgtcttgtcgacgtagcgcaggatttggtcattactgagccagattgcggt
acattcgacggcctagtgatgacgccattcattcaaggtggcgatgtcattgagaacctg
ggtgcacgagttctgggccgtgttgttgctgaagatgtgaagaaagtgggttcggaagaa
gttcttcttgcgcgcaatactttaattgatgaaaaactagccacatttattgaaaatgct
ggtattgacgaaattaaagtgcgttcagtggttaactgtgcatcaacattcggtgtttgt
gcgaaatgttacggccgtgacttggcccgcggtcatcaggtgaaccctggcgaatctgta
ggtgtaatggctgcgcagtcaattggtgagccgggtacacagttaaccatgcgtacgttc
cacgtgggcggtgctgcaagccgaacatctgctgccaacagtattcaagtgcgcaacaaa
ggtactgtacgtttccataatgtgaaaactgtacagcacgcaaaaggccacttggtatcg
acttctcgttcaggcgagatcggtattgcagatgacttgggccgtgaacgcgaacgctac
aaaattccatacggtgcttcgatcattctgaaagatggcgaagaagtagctgcaggcggt
atcgtggcgacttgggatccgcatacacatccacttgttacagaagttgccggtaaagtg
cgtttcagccaaattgctgatggcgtaacggtaacctctaaaactgatgatgcaacaggt
atgaccacgatcgaaatcttgccagtgacttcacgtcctgcgtcaggcaaagatttacgt
cctgcagttgtgttagacacagttgatggcggtgaacagttctacttcctgccgcaaaac
acgattctttctgtccgtaatggcgaaacaatcggtgtcggtgatgttatcggccgtgta
ccgcaagaaacttcacgtacccgtgacattaccggtggtctgccgcgcgtagctgacttg
ttcgaagcgcgtaagccgaaagagcatgcgatccttgctgaaatttcaggtgtggtcagc
ttcggtaaagaaacgaaaggcaaaaaccgtttagtgattaccccggatgacggttctgag
atctacgaagaactgattccgaaatggcgtaccattaacgtgttcgaaggcgaacatgtg
aaccgcggtgaaacgatttctgacggtccgcaaaacccgcatgacatcttgcgtctgaaa
ggtgaagtggcgttgactaactacatcgtgaacgaagttcaagacgtataccgcctgcaa
ggtgtgaaaatcaacgataagcatattgaagtgatcgtgcgtcaaatgctgcgtaaagtt
gacatcacggatggcggcgatacaagcttcattaaaggcgaacaagtggattacatccgc
gttgtcggtgaaaaccaggctgtattggctcagaacaagttccctgcgaagtttgaacgt
cagttaatgggtatcaccaaagcatcgctttctactgattcgttcatctctgctgcatcg
ttccaggaaacaactcgcgtgttgactgaagcggctgtaacaggcaaagaagatgacttg
cgcggtctgaaagaaaatgtggttgtaggccgtctgattccagcaggtacaggtttggct
taccacttggaacgccgccgtcaagaagcagaagctgctgaacaagagcttcataatgac
ttctctgatgttgatcaggcgcttagccaagcatttagccaagagttcaacaacggtctt
taa
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