Acinetobacter bouvetii: ACBO_28590
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Entry
ACBO_28590 CDS
T07603
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
abou
Acinetobacter bouvetii
Pathway
abou03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abou00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACBO_28590 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abou03021
]
ACBO_28590 (rpoB)
03400 DNA repair and recombination proteins [BR:
abou03400
]
ACBO_28590 (rpoB)
Enzymes [BR:
abou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACBO_28590 (rpoB)
Transcription machinery [BR:
abou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACBO_28590 (rpoB)
DNA repair and recombination proteins [BR:
abou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACBO_28590 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
BSH_YknX
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
BCU66068
LinkDB
All DBs
Position
complement(3134762..3138850)
Genome browser
AA seq
1362 aa
AA seq
DB search
MAYSYTEKKRIRKNFGKLPKVMDVPYLLAIQVDSYRTFLQDGKTPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLILKDRETKSIKDVR
EQEVYMGEMPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVFVRIDRRRKLLATVVLRALGYNNSQILDLFYEKVPVYLDMGSYQ
IDLVPERLRGEMAQFDIADKDGKVIVEQGKRINARHVRQMEAAGLEKLSVPDEYLYERII
AEDVALRGGDVIAANTVLSHEIMVKLAEGGVKQFNILFTNDIDRGSFIADSLRADTTSSR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSNEDITDVLQTLIEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKCNNFGFLETPY
RKVVDGRVTDDVEYLSAIEEVGTVIAQADSGVDKDGNLQEEFVSVRHQGEFVRMPPEKVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLIADKPLVGTGMEANVAHD
SGVCVIANRGGRIEFVDASRVVIRVNEDEMVAGEAGVDIYNLIKYTRSNQNTCINQKVLV
KLGDKVGRGDVLADGPSTDGGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVSSSVKGTVIDVQVFTRDGLEKDERAQAIEKA
QLDAYRKDLKEEYKIFEEAARERIVRLLKGQESNGGGTTKRGDKLSEEVLSGLELADLLE
IQPTDEGIAERLTQIQVFLKEKSTEIDEKFAEKKRKLSTGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDVVLNPLGVPSRMNVGQILETHLGM
AAKGLGDKIDKMMKEQRTVLELREFLDKIYNKVGGEQEDLDSLTDDEILALSGNLRAGVP
LATPVFDGAEESQIKELLELGGISRTGQTVLYDGRTGERFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgcccaag
gtaatggatgttccgtacttgctcgcgattcaagtcgactcgtacagaactttcttgcaa
gatggcaaaactccaaaaaaccgcgaagatatcggtctccaagccgcatttcgttcagtt
tttcctatagaaagttattctggcaatgctgctttagaatttgttgagtatagtcttggt
aagcctgagtttgatgtgcgtgagtgtattctccgcggctcaacttatgcagcgccaatg
cgtgtaaaaattcgtctgatcttaaaagaccgcgaaactaaatcaatcaaagacgtgcgc
gagcaagaagtctacatgggcgaaatgccgctcatgactgataacggtaccttcgttatt
aacggtactgagcgtgtcatcgtatctcaattgcaccgttcgccgggcgtgttctttgac
cacgataagggcaaaacccattcaagcggtaaagtgctttattcagcgcggattattcct
taccgcggttcatggttagactttgaatttgatgcgaaagacctggtctttgtacgtatt
gaccgccgccgcaaattgcttgcgactgtggtgcttcgtgccttaggttacaacaactct
caaattcttgatttgttctatgaaaaagtgcctgtctacctagacatgggcagctatcag
attgatcttgtgcctgaacgcctgcgcggtgaaatggcccaatttgatattgctgataaa
gacggcaaagtcattgtagagcaaggcaaacgtatcaacgcgcgtcacgtgcgtcagatg
gaagcagcagggcttgagaagctttctgttccagatgaatacttgtatgaacgcattatt
gctgaagacgtggctttacgcggcggcgatgtgattgcggcaaataccgtgcttagccat
gaaattatggtgaaattggctgaaggcggtgtgaagcaattcaacatcctgttcaccaac
gatattgaccgcggttcattcatcgcggactctttgcgtgcagatacaacgtccagccgt
gaagaagcgcttgtagaaatctacaaagtaatgcgtccaggcgagccgccgacgaaagaa
gcggctgaaaacttattcaacaacctgttcttctcttctgaacgttatgacctgtctcct
gtaggtcgcatgaagttcaaccgccgtttgggccgcccttacgaagtgggtacagatcag
aagtcacgtgaagttgaaggcattctttcaaacgaagacattacagatgttcttcaaaca
ctgattgaaatccgcaacggtaaaggtgaagtcgatgatatcgatcacttgggtaaccgc
cgtgtgcgttctgtcggtgaaatgacagaaaaccaattccgtgtaggcctagttcgtgta
gagcgtgctgttaaagaacgtctatctcaagctgaaactgacaacttgtctccgcaagat
ttaatcaatgcgaagccagttgctgctgcaatcaaagaattctttggttcaagccaattg
tctcagttcatggaccaaaacaacccattgtctgaaattacacacaaacgtcgtgtatca
gcgcttgggcctggtggtttgactcgtgaacgcgcgggcttcgaagtacgtgacgtacat
caaactcactacggtcgtgtgtgcccaattgagactcctgaaggtccaaacattggtttg
atcaactcactttcagtttacgctaaatgtaacaacttcggtttcttggaaactccatac
cgtaaagttgttgatggccgtgtaacggatgacgttgaatacttatctgcaattgaagaa
gtaggtactgttattgcacaggccgattctggcgtcgataaagacggtaacttgcaagaa
gagtttgtttctgtacgtcatcaaggtgaattcgtacgtatgcctcctgaaaaagtgacg
catatggacgtgtctgcacaacaggttgtatctgtagcagcatcattgattccgttcctt
gaacacgatgacgccaaccgtgcattgatgggttcgaacatgcagcgtcaagctgtgcct
acgttaattgctgacaagccgcttgtaggtacaggcatggaagcaaatgtagcgcatgac
tctggtgtgtgtgtaattgcgaaccgcggcggccgcattgaatttgttgacgcatcacgt
gtcgtgatccgtgtgaatgaagacgaaatggttgctggtgaagcaggcgtagatatctac
aacctgatcaaatacacccgttcgaaccaaaacacctgtatcaaccagaaagttcttgta
aaactgggtgataaagttggccgcggtgacgtattggctgatggtccatcgacggatggc
ggtgagctggcgctgggtcaaaacatgcgcgtagcgttcatgacttggaacggttacaac
tacgaagactcgatcttattatctgagcgcgtacttcaagaagaccgtttgacgtctatt
cacatccaagaattatcatgcgtcgcgcgtgatactaaactgggtgctgaagaaatcact
gcggatattccaaacgtgggtgaagctgcactgtctaagcttgatgaatcaggtattgtt
tacatcggtgctgaagtcactgctggcgatatcttggttggtaaagtgacgcctaaaggt
gaaactcagctgactcctgaagaaaaactgcttcgcgcaatcttcggtgaaaaagcggct
gacgtaaaagattcatctttacgtgtatcttcatctgtgaaaggtacggttattgacgtt
caagtgtttacacgtgatggtcttgaaaaagacgaacgtgctcaagcaattgaaaaagcg
cagttagatgcataccgcaaagacttgaaagaagaatacaaaatcttcgaagaagctgcg
cgtgaacgtattgtgcgcttgctaaaaggtcaagaatcgaatggcggcggcacaactaaa
cgcggtgacaaactttctgaagaagtattgtctggtttagagcttgctgatctgcttgaa
attcagcctacagacgaaggcattgctgagcgcttaactcaaattcaagtgttcttgaaa
gagaagagcactgaaattgatgagaaatttgctgagaaaaaacgcaaactttctacaggc
gatgagcttacaactggtgtattgaaagttgttaaagtttacttagctgtaaaacgccgc
atccagccgggtgataagatggcgggtcgtcacggtaacaaaggtgttgtatctaacatc
ttgcctgtagaagacatgccgcacgatgccaacggtgttcctgtagacgtggtgcttaac
ccgctgggtgtaccgtcacgtatgaacgtgggtcagattcttgagactcacttgggcatg
gcagcgaaaggtcttggcgacaaaatcgacaagatgatgaaagagcagcgcactgttctt
gaacttcgtgaattcttagacaagatttacaacaaagttggcggcgagcaagaagatctt
gacagcttaactgatgatgaaatcttggcgctttcaggcaacctgcgtgcaggtgttcct
ttggcaacgcctgtatttgacggtgctgaagaatcacaaattaaagaattgctagagctt
ggcggcatttcacgtactggtcaaacagtattgtatgatggccgtactggtgagcgtttc
gaccgtcctgtaactgtaggttacatgtacatgctgaaactgaaccacttggtagacgac
aaaatgcatgcgcgttctactggttcttattctcttgttacgcagcagccattgggcggt
aaagcgcagttcggtggtcagcgtttcggtgagatggaagtctgggcactggaagcatat
ggcgcagcgtacacgctccaagaaatgcttacagttaagtcggatgacgttgaaggccgt
acccgcatctataagaacattgtagatggcaaccattatatggatccgggcatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgactaa
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