Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT100387
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Entry
AGABI1DRAFT100387 CDS
T03136
Symbol
AGABI1DRAFT_100387
Name
(RefSeq) hypothetical protein
KO
K12856
pre-mRNA-processing factor 8
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI1DRAFT100387 (AGABI1DRAFT_100387)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abp03041
]
AGABI1DRAFT100387 (AGABI1DRAFT_100387)
Spliceosome [BR:
abp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
AGABI1DRAFT100387 (AGABI1DRAFT_100387)
Complex C
U5 SnRNP specific factors
AGABI1DRAFT100387 (AGABI1DRAFT_100387)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
JAB
Corona_5a
Motif
Other DBs
NCBI-GeneID:
18821771
NCBI-ProteinID:
XP_007330065
JGI:
Agabi_varbur_1_100387
UniProt:
K5XW14
LinkDB
All DBs
Position
Unknown
AA seq
2352 aa
AA seq
DB search
MSFPPPPPGFMPPPPPGMPPQNNASSSRMPPEVIAQKTQKWVQMQRKRYGEKRRGGYVDM
GKQDLPPEHVRKIIKDHGDMSNRKFRNDKRVHLGALKYVPHAVMKLLENIPFPWEQVREV
PVLYHITGAITFVNEIPRVIEPVYHAQWSTMWLAMRREKRDRRHFKRMRFPPFDDEEPPL
DYGDNVLDVEPLEAIQLDLDEDEDAAIIDWFYDAKPLIDTKSVNGSSYKYWSLSLPEMAN
LYRLGRTLLSDQADKNASYLFDKKSFFTAKALNMAIPGGPKFEPLYRDMDAFDEDWNEFN
DINKVIIRQQIRTEYKVAFPHLYNSLPRSVHISPYHYPKNVYIRTDDPDLPAFYFDPLIN
PISLRGFTQKNAPLVSHEDSVFGPNGADDDEFKMPEGLEPFLKEKDLENDLTAEGIALWW
APEPYNRRSGRMRRAQDIPLVKGWYLEHCPPNQAVKVRVSYQKLLKCFVLNELHTRPEKA
MSKKNLFRQLKTTKFFQTTRLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNMNLKP
VKTLTTKERKKSRFGNAFHLCREILRLTKLVVDAHVQFRLGNVDAFQLADALQYIFSHIG
ALTGMYRYKYKLMRQVRMTKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGIVP
LLERWLGNLLARQFEGRNSKGIAKTVTKQRVESHFDLELRAAVMHDILDMMPESIKQNKS
KTILQHLSEAWRCWKANIPWKVPGMPTAIENIILRYIKSKADWWCSVAHYNRERIRRGAT
VDKAVVKKNLGRLTRLYLKAEQERQNAYLKDGPYISAEEAVAIYTATVHWLESRKFSPIP
FPPLSYKHDTKLLVLALEKLKEAYSVKGRLNQSQREELALIEQAYDNPHECLSRIKRLLL
TQRAFKESGIEFFDTYDKLIPCYDIEPVEKITDAYLDQFLFFEADKRGLFPAWVKPADTE
PPPLLVYKWCQGINNLTDIWETSEGECVVMMETVLSKVYEKIDLTLLNRLLRLILDHNLA
DYITAKNNTVLTYKDMAHTNAYGLIRGLQFSAFVFQYYGLVLDLLILGLQRASEMAGPPQ
LPNNFLQYRDSSTETRHPIRLYSRYVDRLHILFRFSADEARDLIQRYLSANPDPTNNNVI
GYNNKRCWPRDCRMRLIKHDVNLGRAVYWNIKQRLPRSLTTIEWENTFVSVYSQNNPQLL
FSMSGFEIRILPKIRTISGEQFSLKDAVWNLTNEQTKERTAQAFLRVSDDGVQQFNNRIR
QVLMSSGSTTFSKIVNKWNTALIGLMTYYREAVIHTNELLDALVKAENKIQTRVKIGLNS
KMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVAVTHFRAGMSHEEDQLI
PNLYRYLQPWEAEFLDSARVWSEYSMKRKEANAQNRRLTLEDLEDSWDRGIPRINTLFQK
DRHTLAYDRGWRVRTDWKQYQLLKHNPFWWTSQRHDGKLWQLNNYRVDVIAALGGVEGIL
EHTLFKGTYFPTWEGLFWEKASGFEESMRYKKLTNAQRSGLNQIPNRRFTLWWSPTINRA
NVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELEPLQ
IETVQKETIHPRKSYKMNSSCADILLFSSYKWNISRPSLVTDAKDVLDGTTSNKYWIDVQ
LRWGDFDTHDIERYTRAKFLDYVSDSMSIYPSPTGVMIGMDLAYNLWSAYGNWFPGMKPL
IQQAMAKIMKANPACHVLRERIRKGLQLYSSEPTEPYLNSQNYSELFSNQIIWFVDDTNV
YRVTIHKTFEGNLTTKPINGAIFIFNPRSGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEV
AALVRSLPVEEQPKQVIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACMKMEKFGDL
ILRATQPQMVLFSLYDDWLKSISSYTAFSRLILLLRGLHVNNEKAKVILHPDKSTITEPH
FVWPSLSDEEWIKVEVAMKDLILQDFGKRNSVNIASLTVSEIRDIILGQEIAAPSVQRQQ
MAELEKSTEAQSQVTAVQTQTTNVHGDTIQTVTTTNYEQQTFSSKSDWRVRAISATHLAL
RLQHIYVSNDDVKDDAGSFTYVLPKNILRAFVTASDLRTQVVAFLYGVSPIDNKQVKEIK
AVAWVPQRGSNNNVELPSNLPKDDFLLKDLEPLGWIKTQSLEIPHLSPTDVTTQAKLMAE
HPEWGSSSICITTSFTPGSVSLSAHSLTVAGFEWGRKNQDTSANPPGFNPNMSERVQLLL
SDRILGMTLVPEGKVWNYGIGLTQMWTPNMGYSMTLDTPLLFWAEEHRPAAFLTFANLEQ
GEDSADVENSFA
NT seq
7059 nt
NT seq
+upstream
nt +downstream
nt
atgagttttcctcctcctccgcccggttttatgccaccccctccaccaggcatgccgcct
caaaataacgcttcgtcttcgcgtatgccacctgaagtcatcgcgcagaaaactcaaaaa
tgggtgcaaatgcagagaaagcgatatggcgagaaacgcagaggaggctacgttgatatg
ggcaagcaggatctccctcctgagcatgtcagaaaaattatcaaagaccacggagacatg
agtaaccgcaagttcagaaacgacaagcgcgttcatctcggtgccctcaagtacgtccct
catgccgttatgaagttgttggaaaacatcccattcccttgggaacaagttcgcgaagtc
cctgtgctctaccatatcactggtgccattacattcgtgaacgagatacctcgtgtcatt
gagcccgtctatcatgcgcaatggagcacgatgtggcttgctatgcgtcgagagaagagg
gaccgccggcacttcaaacgtatgcgtttccctccgtttgatgacgaagaacctcctttg
gactacggggacaacgtactcgacgtcgagccgctagaagctatccaattagatttggat
gaagatgaagatgccgcaatcatcgactggttctatgacgcgaagcccctcattgacacg
aagtccgtgaatggatcatcttacaagtactggtcactatccttaccggagatggccaac
ttgtatcgtctcggccgtaccctcctttcggaccaggccgataaaaatgccagctacttg
ttcgacaaaaagtcatttttcactgccaaggcgctcaacatggccataccgggaggaccc
aagttcgaacctctataccgggacatggatgcttttgatgaagattggaatgagtttaac
gatataaacaaagtcatcattcggcagcaaattcgcacagagtacaaagtcgctttccct
cacctttataattccctccctcgttctgtgcatatttcaccttatcattaccccaagaac
gtctacatccgtactgatgatcctgacctacctgctttctacttcgatcctctcattaac
cctatatcccttcgtggtttcacccaaaaaaatgcaccactggtctctcatgaggatagc
gttttcggcccgaatggtgcagatgatgatgaatttaagatgcccgaaggactggaacct
ttcctcaaggagaaggatcttgagaatgacctcaccgctgaaggtattgctctttggtgg
gcacctgaaccgtataaccgtcgttctggtcgtatgcgtagggctcaagatattccactt
gtcaagggatggtatctcgaacactgtcctcccaaccaagctgtcaaagtccgcgtttcg
tatcaaaaattgctcaagtgtttcgtcctcaacgaattgcatacgaggccggagaaggcg
atgtcgaagaagaacttgttccgtcaacttaagactaccaaattcttccagactacaagg
ctggactgggttgaggctggactccaagtctgcagacagggatataacatgctgaacctt
ttgattcatcgcaagaatctgaactacctccatcttgattataatatgaacctgaaacca
gtcaaaactcttacgactaaggaacgtaagaaatctcgattcggaaatgctttccacttg
tgtcgcgaaatccttcgccttaccaagcttgtcgttgatgctcacgttcaattccgtctt
ggcaacgtcgatgccttccagctggctgatgcacttcaatacatctttagccacatcggt
gctttgacgggtatgtaccggtacaagtacaagttgatgagacaagtacgcatgaccaag
gatttgaagcacctgatctactatcgctttaacacaggccctgttggtaagggtccgggc
tgtggattctgggcgcccggctggcgtgtctggcttttcttcatgcgtggtatcgtcccc
ctacttgagagatggctaggaaacttgctcgctcgtcaatttgaagggagaaacagcaaa
ggcattgccaagactgtcaccaagcaacgcgtagagtctcactttgatcttgaattgcgt
gctgctgttatgcacgatatccttgacatgatgcctgaatctatcaagcaaaacaaatcg
aagactatcttgcaacatttgtctgaggcttggaggtgctggaaagctaatatcccttgg
aaggttcctggtatgccgactgccatcgaaaacatcattctacgctacatcaagagcaag
gccgattggtggtgttcggttgcacattataatcgtgaacgtatccgtcgtggtgccact
gtcgacaaggctgttgtgaagaagaacctcggccgtttgacgcgtctttacctcaaggct
gagcaagaacgccagaatgcctacctcaaggatggtccttacatcagtgctgaagaggcc
gtcgctatctatactgcgactgtccactggttggaatcccgcaaattctcaccgatcccc
ttccctcctttgtcatacaaacatgataccaaattgctcgtccttgccctcgagaaactg
aaagaggcatactcggtaaaaggccgtttgaaccagtctcaaagagaagaacttgccttg
atcgagcaagcatatgataatccacatgaatgcctttctcgcatcaaacgtcttttgctc
acccagcgtgctttcaaagaatctggcattgagttttttgatacttatgacaagcttatc
ccttgttatgatattgagcccgttgagaagattactgatgcttatcttgatcaattcttg
ttctttgaggctgataaacgtggacttttccctgcatgggtcaagcctgctgacacggag
cctccaccattacttgtctataaatggtgtcagggcatcaacaacctgacagacatttgg
gaaaccagcgagggtgaatgcgttgttatgatggagactgtcctgtcgaaagtctatgag
aagattgaccttactcttctcaaccgcctgctacgcctcattctcgatcataacctggcg
gactacataactgctaagaataacactgtcctgacctacaaggacatggcgcataccaat
gcttatggtcttattagaggtctccaattttctgctttcgtcttccagtactatggtttg
gtcctcgatctccttatcctcggtctccaacgtgcgagtgagatggcaggccctccgcaa
ttgcctaacaacttcctccagtaccgtgactcatctacggagacacgtcaccctatccgt
ctctattcgcgctacgtggacaggttgcatatcctcttccgcttttcggctgatgaggct
cgcgatctgatccaacgttacctttctgcgaaccctgatccaaccaacaataatgtcatc
ggttacaacaacaaacgttgctggcctcgggattgccgtatgagactcatcaaacacgat
gtcaacctcgggagagcagtttactggaatataaagcagcgtcttcctcggtcgttaacg
acaatcgagtgggagaatacatttgtcagcgtctactcgcaaaacaacccccagctcctc
ttttccatgagtggtttcgagatacgcatcttacccaagatcaggaccatttccggagag
cagttctccctcaaagacgccgtttggaatctcaccaacgagcaaacgaaggagcgtacc
gctcaagcatttttacgtgtatcagacgacggtgttcaacagtttaataaccgtatccgt
caagtgcttatgagctccggttcgacaactttctccaagatcgtcaataaatggaacacg
gcgttgatcggtttaatgacgtactatcgagaggcagtcatccataccaatgaactctta
gatgcactcgtcaaggccgaaaacaagattcaaactcgtgtcaaaattggtttgaatagt
aagatgccttcgaggttccctcctgtcgtattctatactcctaaggaactcggtggtctg
ggaatgttgtcgatgggtcatgttttgattcctcaaagcgatcttcggtggtcaaagcag
accgacgttgccgttacccacttccgcgctggtatgtcacatgaggaagaccagctgatt
cccaacttgtatcgctaccttcaaccatgggaggccgaattccttgattctgctcgcgtt
tggtcagaatattctatgaagaggaaggaagctaatgcacagaaccgtcgtctaaccctg
gaagatttagaagacagttgggatcgtggtatccctcgtatcaatactcttttccaaaaa
gataggcacacattggcctatgatcgtggttggcgtgtacgcacagattggaagcagtat
cagttgctcaagcacaacccattctggtggacatcgcagcgacatgatggaaaactttgg
caactcaacaattaccgtgtagatgtcattgctgctcttggtggtgttgaaggtattctt
gagcacactttgttcaaaggaacatatttccccacttgggagggtctcttctgggagaag
gcatctggattcgaggagtcgatgaggtataagaaactgaccaacgcgcaacgttccggt
ctgaatcagatccctaaccgtcgattcacactctggtggagtcctacgatcaaccgtgct
aacgtatatgttggcttccaagtgcaactcgatcttactggcattttcatgcacggaaag
attccgacgttgaagatcagtttgattcaaatattccgtgctcacttgtggcagaagatc
catgagagtgttgttatggatttatgtcaagttttcgatcaggaactcgagcctcttcaa
attgaaactgtgcagaaggaaacgattcacccccgaaagagttacaagatgaactcatct
tgcgctgatattctactgttctcttcatacaagtggaatatctctcgtccgtcgttggtc
acagatgctaaggatgttcttgacggaactacgagcaacaagtactggattgatgttcag
ctccgttggggtgatttcgacactcatgatattgaacgatacacccgagcgaagtttttg
gactacgtttctgattctatgagcatttatccctctcccaccggtgttatgattggtatg
gacttggcttacaacttgtggtcagcctatggaaactggttcccggggatgaaacccctt
attcaacaagctatggccaagatcatgaaggccaatcccgcctgccacgtacttcgtgaa
cgtatccgcaaaggtctccagttatattcatctgaaccaacggaaccatacctcaacagt
cagaactactccgagttgttctctaatcaaatcatctggttcgttgacgacaccaacgta
tacagagttacgatccataagactttcgaagggaacttgaccaccaaacccatcaatggt
gctatctttatcttcaaccctcgttccggacagttgttcttgaagattatccacaccagt
gtctgggctgggcagaagcgtctgggtcaattggctaagtggaaaactgctgaagaagtt
gccgcgcttgttcgctccctccccgtcgaagagcagcctaagcaggtcattgtcacccgt
aagggcatgcttgaccctcttgaggtccatttgcttgatttcccgaacatcgttatcaag
ggaagcgagctacaactgcccttccaagcttgcatgaagatggagaaattcggtgatctg
atcttacgtgccactcaacctcagatggtgctattcagcctttatgatgactggctcaaa
tctatctccagctacaccgccttttcccgtctcatcctgcttcttcgtggactgcacgtc
aataatgagaaagccaaggtcattctccatcctgacaaatccacgatcaccgagccgcat
ttcgtgtggccttctctttctgacgaagaatggatcaaggtcgaagttgcgatgaaggac
ctcattcttcaggactttgggaagcggaacagtgtcaacatcgcctcattgacagtcagc
gaaattcgtgacatcatcctcgggcaagagatcgcagcaccatccgttcaacgtcagcaa
atggctgagcttgagaagagcaccgaagctcaaagtcaggtgacggctgttcaaactcaa
accaccaacgttcatggtgacaccattcaaactgtcactacgaccaactatgaacaacag
actttcagtagcaaatctgactggcgtgtacgcgcgatttctgccacccaccttgccctc
cgtctgcaacacatctacgtctccaatgatgacgtgaaggatgacgctggctcctttacc
tatgtccttcccaaaaacattctgcgtgcctttgtcactgcgtcagaccttcgaacacag
gtcgttgccttcttgtatggtgtctctccaattgacaacaagcaagtcaaagagataaag
gctgttgcttgggttcctcaacggggtagtaacaacaatgtcgagcttccatctaatcta
cccaaggatgacttccttctcaaagaccttgaacctcttggatggatcaagactcaatcg
ctcgaaattccacacctatcacccaccgatgttacgactcaagctaaactcatggctgaa
catcccgaatggggatcgtcgtctatctgtatcacgacctccttcacgccgggttccgtg
tcactatcggctcattcgctaaccgttgctgggtttgagtggggtaggaaaaaccaggac
acgtcagccaatccgccaggctttaaccctaatatgtcggagcgtgtgcaacttttgctg
tctgatcgtattctcggtatgacactggttcccgaaggaaaagtctggaattatggtatt
ggtctcactcagatgtggacgccaaatatgggctatagcatgactcttgatacgccatta
ttattctgggcagaagagcaccgacctgccgccttcttgacatttgccaacttggaacaa
ggcgaggatagtgctgatgttgaaaatagctttgcataa
DBGET
integrated database retrieval system
