Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT110091
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Entry
AGABI1DRAFT110091 CDS
T03136
Symbol
AGABI1DRAFT_110091
Name
(RefSeq) hypothetical protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abp03041
]
AGABI1DRAFT110091 (AGABI1DRAFT_110091)
03009 Ribosome biogenesis [BR:
abp03009
]
AGABI1DRAFT110091 (AGABI1DRAFT_110091)
Enzymes [BR:
abp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AGABI1DRAFT110091 (AGABI1DRAFT_110091)
Spliceosome [BR:
abp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
AGABI1DRAFT110091 (AGABI1DRAFT_110091)
Ribosome biogenesis [BR:
abp03009
]
Eukaryotic type
90S particles
Helicases
AGABI1DRAFT110091 (AGABI1DRAFT_110091)
Pre-60S particles
AGABI1DRAFT110091 (AGABI1DRAFT_110091)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
18822840
NCBI-ProteinID:
XP_007325379
JGI:
Agabi_varbur_1_110091
UniProt:
K5W981
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MTPIQSKSIPLLLAGKDVLGAARTGSGKTLAFLIPAAELLHRLKFKPMNGTGIIIISPTR
ELALQIFGVAKDLMAHHSQTFGIIMGGANRRAEADKLVKGVNLLVATPGRLLDHLENTKG
FIFRNLKALVIDEADRILEIGFEEEMKKIISILPNEDRQSMLFSATQTTKVQDLARVSLR
PGPVYVDVDKEEATSTVSTLSQGYVVCPSDRRFLLLFTFLKKNLKKKVIVFFSSCNSVKY
HAELLNYIDVPVLDLHGKQKQQKRTNTFFEFCNAESGILLCTDVAARGLDIPRVDWIVQF
DPPDDPRDYIHRVGRTARAGKVGKSLLFLLESELGFLRYLKEAKVPLNEFSFPTEKIANV
QSQLEKLLQKNYFLHKSAKDGFRAYLQSYASYSLKKIFDVNQLDLAKVGKAFGFAVPPRV
NVNIGPGRGTSNATQKKRRREEGNDGGMENEVDEEMSGHEEGEEEEEVSRKDVRRENKQR
RIEVHGQKKVGKEMYKKGQERKRLQAAGGQWSR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctatacagtcgaagagcattcctctattacttgctggtaaagacgtcttggga
gcggcgaggactgggtctgggaagacgttagcattcttaatacctgccgccgagcttctg
caccgattaaaatttaaacctatgaatgggactggtattattattatttcacctacgcgt
gaactcgccctacagattttcggcgttgcaaaagacctcatggcgcatcattcacagaca
tttggcatcatcatgggaggcgcaaataggcgcgctgaagctgataaacttgtgaaaggc
gttaaccttctcgtggctacgccaggtcgacttttggatcacctagaaaacacaaaaggc
ttcatttttagaaacctcaaagcattggttatcgatgaggctgataggattctggagatt
ggtttcgaagaagagatgaaaaagatcatttccatcttgcccaatgaggataggcagtcc
atgttgttttccgccacgcagacaacgaaagtacaggatctggcgagggtgtctttacgt
cctggacctgtctatgttgacgtcgataaggaggaagctacaagcactgtttccacgctt
tcccaaggttatgtcgtgtgcccttcggatcgtcggttcctcctactctttacgttcttg
aagaaaaacctcaagaagaaggtcatcgtgttcttttcgagttgcaacagtgtcaagtac
cacgcggagctgctgaactatattgacgtgccggtgttggatttacatggcaaacaaaag
caacagaaacggacgaacactttcttcgagttctgcaatgcagaatctggaattctactg
tgtaccgatgttgccgcccgtggcctcgacattccacgcgtagattggattgtgcagttt
gaccctcctgatgacccgagagactatattcatcgcgttggacgcactgcccgtgcaggg
aaagtcggtaaaagtctgctgttcttattagagagcgagcttggtttccttcggtatttg
aaggaagccaaggttccattaaatgagttcagtttccccacggaaaagatcgcaaatgtc
cagtctcagctcgagaagctactacaaaagaattatttccttcacaagtctgccaaagac
ggattccgagcgtatctacaatcatatgcttcatattcgctgaaaaagattttcgatgta
aaccaacttgatttggcaaaggttggcaaggcgtttggatttgctgtgcctccacgagtc
aatgtcaatattggtcctggacgggggacatcaaatgcgacgcaaaagaagaggagaaga
gaggagggtaacgatggggggatggaaaatgaagtggatgaggagatgagcggacatgag
gaaggagaggaagaagaagaggtttcaaggaaggatgtacgtcgggaaaataagcagaga
cggatcgaggttcatggacagaagaaggtggggaaggagatgtataaaaaagggcaggag
cggaagaggctgcaggctgcgggtgggcagtggagtcggtag
DBGET
integrated database retrieval system
