Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT110722
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Entry
AGABI1DRAFT110722 CDS
T03136
Symbol
AGABI1DRAFT_110722
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03030
DNA replication
abp03410
Base excision repair
abp03420
Nucleotide excision repair
abp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AGABI1DRAFT110722 (AGABI1DRAFT_110722)
03410 Base excision repair
AGABI1DRAFT110722 (AGABI1DRAFT_110722)
03420 Nucleotide excision repair
AGABI1DRAFT110722 (AGABI1DRAFT_110722)
03430 Mismatch repair
AGABI1DRAFT110722 (AGABI1DRAFT_110722)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abp03032
]
AGABI1DRAFT110722 (AGABI1DRAFT_110722)
03036 Chromosome and associated proteins [BR:
abp03036
]
AGABI1DRAFT110722 (AGABI1DRAFT_110722)
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT110722 (AGABI1DRAFT_110722)
DNA replication proteins [BR:
abp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
AGABI1DRAFT110722 (AGABI1DRAFT_110722)
DNA Replication Termination Factors
ELG1-RFC complex
AGABI1DRAFT110722 (AGABI1DRAFT_110722)
Chromosome and associated proteins [BR:
abp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
AGABI1DRAFT110722 (AGABI1DRAFT_110722)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
AGABI1DRAFT110722 (AGABI1DRAFT_110722)
Check point factors
HRAD17(Rad24)-RFC complex
AGABI1DRAFT110722 (AGABI1DRAFT_110722)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_22
AAA_14
RCF1-5-like_lid
AAA_16
nSTAND3
AAA_3
RuvB_N
Viral_helicase1
Rad17
Mg_chelatase
Gp44_lid
MeaB
AAA_assoc_2
nSTAND_NTPase5
RNA_helicase
NTPase_1
AAA_19
DNAX_ATPase_lid
GcpE
NPHP3_N
nSTAND6
DO-GTPase1
SRP54
AAA_11
KTI12
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
18823043
NCBI-ProteinID:
XP_007325836
JGI:
Agabi_varbur_1_110722
UniProt:
K5XL82
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MSTSKGKATNGNAATDPYELPWVEKYRPKVLDDVVGNSDTIERLKVIARDGNCPHLIISG
LPGIGKTTSIHCLAHQLLGDAYKEGVLELNASDERGIEVVRTKIKQFAQKKVTLPPGRHK
IVILDEADSMTPGAQQALRRTMEIFSNTTRFCLACNMSNKIIEPIQSRCAILRYAKLRDQ
EILKRLLEICEEEDVKYNDDGLTALIFTSEGDMRQAINNLQSTFSGFGFVSGDNVFKICD
QPHPIVVQAAIRSCLKGDVDEALGKIKELWDQGYSAVDIVVTLFRVVKTFDEVPEYTKLE
FIKEIGFTHMRILEGVGTLVQLAGLVARLCKMNHKPELFKV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagtacttcaaaaggaaaggcaaccaacgggaacgctgcgacggatccatacgaactt
ccatgggtagagaaatacagaccaaaggtccttgacgatgtcgtagggaactcggatacg
attgaacggctcaaggtgattgcgcgggatggaaactgtccacatctcatcatttcgggc
ctacctggtataggtaaaacgacgagtattcactgtttagcgcaccagctactaggagat
gcttataaagagggtgtgctagaacttaatgcctcggatgagcgtggtattgaagttgtg
cggacaaaaatcaaacagtttgcacaaaagaaagttacactaccacctggacgacacaag
atcgtgattttggatgaagcggatagtatgacaccaggggcacaacaagcactccgaagg
acaatggaaatcttctccaacacaactcgcttttgccttgcgtgtaatatgagcaacaag
atcatcgaacctatccaatcgcgttgtgcaatcttacggtatgcgaaactgcgggatcaa
gaaattctgaaacgattactcgaaatttgtgaggaagaagatgtgaaatataatgacgat
ggtctgacagctttgatatttacgtcggagggggatatgcgacaagctattaacaatctc
caatcgacattttcaggatttggattcgtatccggcgataatgtattcaaaatttgtgat
caaccccacccgattgtcgtacaagctgccattcggtcatgtctaaaaggagacgtggat
gaggctctaggaaaaataaaggaactctgggaccaagggtatagtgctgtggatattgtg
gtaaccttgttcagagtggtgaagacgtttgatgaggtaccagagtacaccaaactggaa
tttatcaaggaaattgggtttacgcatatgcggattttggaaggggtggggacacttgtt
caactagcgggcctggttgcgagattgtgcaagatgaatcacaagccagagttgttcaaa
gtgtga
DBGET
integrated database retrieval system
