Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT111556
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Entry
AGABI1DRAFT111556 CDS
T03136
Symbol
AGABI1DRAFT_111556
Name
(RefSeq) hypothetical protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03013
Nucleocytoplasmic transport
abp03015
mRNA surveillance pathway
abp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI1DRAFT111556 (AGABI1DRAFT_111556)
09122 Translation
03013 Nucleocytoplasmic transport
AGABI1DRAFT111556 (AGABI1DRAFT_111556)
03015 mRNA surveillance pathway
AGABI1DRAFT111556 (AGABI1DRAFT_111556)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT111556 (AGABI1DRAFT_111556)
03041 Spliceosome [BR:
abp03041
]
AGABI1DRAFT111556 (AGABI1DRAFT_111556)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
AGABI1DRAFT111556 (AGABI1DRAFT_111556)
Spliceosome [BR:
abp03041
]
Common components
Common spliceosomal components
Cap binding complex
AGABI1DRAFT111556 (AGABI1DRAFT_111556)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
18823329
NCBI-ProteinID:
XP_007326888
JGI:
Agabi_varbur_1_111556
UniProt:
K5XHU5
LinkDB
All DBs
Position
Unknown
AA seq
227 aa
AA seq
DB search
MAHVVTPLDQPSNYKDSQARVDRSKQAELLGKSSTLYIGNLSFYTTEEQIFELFSKCANA
EDGGGIKRIIMGLDKNTRTPCGFCFVEYYTHAEALACMRFASGTKLDERIIRCDLDLGYK
EGRQFGRGKSGGQVRDEHRQDYDPGRGGWGAQAQRLEIERRREVEERYADAQDGPGAVAG
GGEDWKDQGGSQVENKLKRGRSPDDDGEQARMAQRSRLDDDMDINRM
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggcacatgtggtgactcccctcgaccagccctcaaattataaagactcgcaggcaaga
gtagaccgctcaaagcaggcagaactcttaggaaaatcatcaaccctctatattggtaac
ctgagtttttatacaacagaagaacagatctttgagcttttttcgaaatgtgctaatgcg
gaagatggaggtggtataaaacggattattatgggtttggacaagaacactcggacacca
tgtggattctgttttgtggaatactacactcatgctgaagcactcgcatgtatgaggttc
gctagtggaactaaactcgatgaacgtatcatccgttgcgatttggatctcggatataaa
gaaggtcgacaatttggtcgaggaaaaagtggaggtcaagtccgtgatgagcatagacag
gattatgatcctggtcgtggtggatggggtgctcaagctcaaagactagaaattgaaaga
cgtagagaggtggaggaacggtatgcagatgctcaggatggtccaggtgctgtggctggt
ggaggtgaagattggaaagaccaaggtggttctcaagttgagaacaaactcaagcgcgga
cgttcaccagatgatgacggtgaacaggcaagaatggctcaacggtctcggttagacgac
gacatggatattaatcgaatgtag
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