KEGG   Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT112188
Entry
AGABI1DRAFT112188 CDS       T03136                                 
Symbol
AGABI1DRAFT_112188
Name
(RefSeq) hypothetical protein
  KO
K12876  RNA-binding protein 8A
Organism
abp  Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03013  Nucleocytoplasmic transport
abp03015  mRNA surveillance pathway
abp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:abp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AGABI1DRAFT112188 (AGABI1DRAFT_112188)
  09122 Translation
   03013 Nucleocytoplasmic transport
    AGABI1DRAFT112188 (AGABI1DRAFT_112188)
   03015 mRNA surveillance pathway
    AGABI1DRAFT112188 (AGABI1DRAFT_112188)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abp03019]
    AGABI1DRAFT112188 (AGABI1DRAFT_112188)
   03041 Spliceosome [BR:abp03041]
    AGABI1DRAFT112188 (AGABI1DRAFT_112188)
Messenger RNA biogenesis [BR:abp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     AGABI1DRAFT112188 (AGABI1DRAFT_112188)
Spliceosome [BR:abp03041]
 Complex C
  Other components
   EJC/TREX
    AGABI1DRAFT112188 (AGABI1DRAFT_112188)
SSDB
Motif
Pfam: RRM_1 RRM_3
Other DBs
NCBI-GeneID: 18823540
NCBI-ProteinID: XP_007327761
JGI: Agabi_varbur_1_112188
UniProt: K5Y2C6
LinkDB
Position
Unknown
AA seq 163 aa
MSEDEMNIDDVEAGGAVRRRGRGFQNTGDNDLKSSTDATYDRVESTTTGADTRAARSVEG
WIVLVTNVHEEATEEDVQDKFAEFGEIKNLHLNLDRRTGYVKGYTLVEYETMGEAQAAID
GASGTTLLEQTVQCDYAFVRPPPTGPKKGRMRGRSASPARRAK
NT seq 492 nt   +upstreamnt  +downstreamnt
atgtctgaagatgaaatgaatattgacgacgtcgaggccggaggtgccgttcgtaggaga
ggaagaggttttcaaaacacaggcgacaacgacctaaaatcgtcgactgacgcgacctac
gatcgagtagagtccaccactacaggcgccgacaccagggctgcacgatctgtcgaagga
tggatcgtgttagtcaccaacgtccacgaagaagcaacggaggaggatgtgcaagacaaa
tttgcagaattcggagaaataaaaaacctccatctcaatctcgaccgtcggacgggttat
gtgaagggttataccctcgttgaatacgagactatgggtgaagcccaggccgcaattgac
ggtgcctctggaactacactactggagcagacggtgcagtgtgattacgccttcgttcgc
ccccctccaactggccccaagaaaggtagaatgcggggtcgtagtgccagtccagcccgt
cgcgccaagtag

DBGET integrated database retrieval system