Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT112673
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Entry
AGABI1DRAFT112673 CDS
T03136
Symbol
AGABI1DRAFT_112673
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03020
RNA polymerase
abp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AGABI1DRAFT112673 (AGABI1DRAFT_112673)
09124 Replication and repair
03420 Nucleotide excision repair
AGABI1DRAFT112673 (AGABI1DRAFT_112673)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abp03021
]
AGABI1DRAFT112673 (AGABI1DRAFT_112673)
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT112673 (AGABI1DRAFT_112673)
Transcription machinery [BR:
abp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
AGABI1DRAFT112673 (AGABI1DRAFT_112673)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
AGABI1DRAFT112673 (AGABI1DRAFT_112673)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
18823733
NCBI-ProteinID:
XP_007328515
JGI:
Agabi_varbur_1_112673
UniProt:
K5W2E9
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MQAPEDLEPIVRIRELAKDKVNFVLENVDLAFANSFRRVMMADLPTVAIDMVEIEINTTV
LPDEFIAHRLGQIPLLSSNCDEAIRYTRDCTCLAGCPFCSIMLNLHVSCNDDNTMNVTSN
HLDIMPFPEDQEQQTDPGEELSKRGEYFGHPVGKNDPNASPILICKIRKGQELKAKCTAK
KGIAKEHAKWSPCSAVAFEYDPHNKLRHTSYWFETDIKAEWPLGENAKEEEPPRDDEPFD
YNAKPTKFYFEVETDGSLSPQEVVMKGLAELQTKLANLIYGLKTQPELEMIPSDQPPNGA
AAETGGWSMSAANPPGPASSGLPTGAWTGGASSQWGNTSPGQRSATNATGWGASPNAASW
SSGATAGWSSPGQQSNGWNV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaccggaagacctcgaacccattgtcaggatacgcgaactcgctaaagataaa
gtcaattttgttctcgagaatgtagatctcgctttcgccaactcatttcgtcgagtgatg
atggcagaccttccaaccgtcgccattgacatggttgaaatcgaaatcaacacgaccgta
ttaccagatgaattcattgctcatcgtctggggcaaatcccattactaagttcaaattgc
gacgaagctattcgatatacaagagattgtacatgccttgcaggctgtcctttttgctcc
attatgctcaaccttcatgtttcatgtaatgacgataacactatgaacgtcacaagtaac
catctcgatatcatgcctttcccggaagaccaagaacagcagaccgatccaggagaagaa
ttgtcaaagcgaggagaatactttggccatcctgtggggaaaaacgacccaaatgcgtca
cccatcctgatctgtaagatccgtaaaggccaagaattgaaagccaagtgtaccgctaaa
aagggtatagccaaagaacatgccaaatggtcgccatgctctgctgtggctttcgagtat
gatccccacaataaactccggcatacctcatattggttcgagaccgacataaaggctgaa
tggcccctgggcgagaatgcgaaggaggaggaaccaccacgagacgatgagcccttcgat
tacaatgcgaagccaacgaagttctattttgaagttgaaactgatggcagcctaagcccg
caagaggtcgtaatgaagggtctcgctgaactgcaaacaaaattagctaacctcatttac
ggcctgaaaacgcagccagagcttgagatgatacctagtgatcaaccaccaaatggtgcc
gcagccgaaacggggggttggagtatgtcagctgctaatcctccgggcccagcatcatct
ggactcccaacaggcgcttggactggaggtgcgagcagccagtggggaaatacaagtccg
ggacaaagaagtgctaccaacgccacaggctggggtgcgagtccaaatgctgcatcgtgg
tctagtggcgcaactgcaggctggtcaagtccaggtcagcaatcgaacggttggaatgtg
tga
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integrated database retrieval system
