KEGG   Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT112714
Entry
AGABI1DRAFT112714 CDS       T03136                                 
Symbol
AGABI1DRAFT_112714
Name
(RefSeq) hypothetical protein
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
abp  Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03040  Spliceosome
abp04139  Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:abp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AGABI1DRAFT112714 (AGABI1DRAFT_112714)
 09140 Cellular Processes
  09141 Transport and catabolism
   04139 Mitophagy - yeast
    AGABI1DRAFT112714 (AGABI1DRAFT_112714)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abp03019]
    AGABI1DRAFT112714 (AGABI1DRAFT_112714)
   03041 Spliceosome [BR:abp03041]
    AGABI1DRAFT112714 (AGABI1DRAFT_112714)
   03032 DNA replication proteins [BR:abp03032]
    AGABI1DRAFT112714 (AGABI1DRAFT_112714)
Messenger RNA biogenesis [BR:abp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     AGABI1DRAFT112714 (AGABI1DRAFT_112714)
Spliceosome [BR:abp03041]
 Complex A
  U1 snRNP components
   Sm proteins
    AGABI1DRAFT112714 (AGABI1DRAFT_112714)
  U2 snRNP components
    AGABI1DRAFT112714 (AGABI1DRAFT_112714)
 Complex B
  U1 snRNP components
    AGABI1DRAFT112714 (AGABI1DRAFT_112714)
  U4/U6.U5 tri-snRNP components
    AGABI1DRAFT112714 (AGABI1DRAFT_112714)
 Complex C
  U2 snRNP components
    AGABI1DRAFT112714 (AGABI1DRAFT_112714)
DNA replication proteins [BR:abp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     AGABI1DRAFT112714 (AGABI1DRAFT_112714)
SSDB
Motif
Pfam: LSM SM-ATX E3_binding LSM14
Other DBs
NCBI-GeneID: 18823746
NCBI-ProteinID: XP_007328541
JGI: Agabi_varbur_1_112714
UniProt: K5WZP3
LinkDB
Position
Unknown
AA seq 128 aa
MATAGLGVPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKDITVTGRDGRVSQ
LDQVYIRGSMIRFFIVPDMLQNAPMFKRVGPNAMRGRGIGTARGRATIMRANARRGRGAV
PAPRGIRR
NT seq 387 nt   +upstreamnt  +downstreamnt
atggccaccgctggactgggagttcctgtaaagctccttcatgaatctttgggccatatc
attaccgtcgagctgaagaccggtcagctctacagagggaaactagctgaagcggaggac
aacctgaacatatccctgaaggacatcacggtcaccggtcgggatggacgtgtatctcaa
ctggatcaagtttacattcgtggtagcatgattcgctttttcattgttcctgatatgtta
cagaatgccccaatgttcaagcgcgtaggcccaaatgcgatgagaggtagaggtatcgga
acagctcgtggacgtgccacgattatgcgagccaatgcgcgccgtggacgcggtgccgtt
ccagctcctagagggatccgacgataa

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