Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT113761
Help
Entry
AGABI1DRAFT113761 CDS
T03136
Symbol
AGABI1DRAFT_113761
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGABI1DRAFT113761 (AGABI1DRAFT_113761)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT113761 (AGABI1DRAFT_113761)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AGABI1DRAFT113761 (AGABI1DRAFT_113761)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AGABI1DRAFT113761 (AGABI1DRAFT_113761)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
18824101
NCBI-ProteinID:
XP_007329903
JGI:
Agabi_varbur_1_113761
UniProt:
K5X7J0
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MNRPAFPTPGQPQQRPPNLTSNPALANQFRAPFPNYGLPPRNVNVLQGGGFVPTLQPNTH
RTPSQAQVQSMTSQPAPGFLPSRGQGIHAFGGALGQHQTASSLQQQMQSQQSNGTAQSVT
SSDAVSLDPNDFPALGSNPTTNPTGSSNNGGTGNGQSYASQAGTGVQIGGSGAVGSSGST
GVAGTGNANQPRDFTADDFPALGGQSQSQNQTSSAQNPISAQESHSHPPGLNGFPHTDHS
QHQHRQNLLGALGGSIPPGTPGMLNLAGTQSRNVHPGFQQGQGEDKQQQHQRSNYALKLN
QSSHPAWSSPTPNPPPTSANTNSNGTHLQSISTHPNVPPGVPSPSTGPFPQTPGLGTNSG
GVTQSTPFPPNGVAPGDSHVNASSHPPSNPNTSTNQNTSSLQNSAVSHHPHPQTPAQQVL
ISPADRWGLLGLLEMIKNASSDVDGGLSSMGTDLGTMGLDMNYPGSLYQTFITPWADQSA
AHSVEPDFNLPACYLSVQAAAPGLLKASAFSDETLFFMFYSSPRDALQEVAAQELFNRNW
RYHKELRLWITKETGTTPSQKVQGGEQGQYTFWDPENWCKERKEMTVLYVDLEEKSQPAF
ANSQSLVPANQSQNAPQQQQQQSVQAQLNAQVQATQRGASFQMGMASL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaccagcctttccaacgccaggccaacctcagcagagaccaccgaaccttacc
agcaacccagccctcgcgaatcaattccgtgcaccgtttccaaattacggtctaccgccg
cgaaacgtcaatgtcctccagggaggcggtttcgtgcctacgctgcagccaaacacccac
agaacaccctcgcaggcacaagtgcagtccatgacctcgcagccggcaccaggtttcctc
ccatcgaggggacagggcatccatgctttcggaggagcacttggccaacatcaaacggca
agttcgctacaacaacagatgcagtcacaacagagtaatggcacagcgcagtcagtgaca
tctagcgacgccgttagcttggacccgaatgacttccccgcacttggatcaaatccaaca
acgaacccaacaggaagcagtaacaatggggggactgggaatggacagagttacgcaagc
caggctggaacaggcgtgcaaataggcggttcaggggcggtaggctcatcgggatcgact
ggtgtagcgggaacagggaacgcgaatcaacctcgagatttcactgccgatgatttccct
gcgcttgggggacagagtcagtcacaaaatcagacttcgtcggcacaaaacccaatttcg
gctcaagagagccattcacatcctccgggattgaatggcttcccacatacggatcactct
cagcatcaacaccgacaaaatcttctgggggcgttaggtggcagcataccacctggtacg
ccgggcatgcttaacctcgctggcactcagtcgaggaatgtgcatcccgggtttcaacag
gggcaaggagaggataaacagcagcaacaccagcggagcaactatgctcttaagctgaat
caatcctctcacccagcatggagttctccgacgcccaatcctccaccaacatcagcgaac
accaattcaaatgggacacatttacagagcatatcgacgcatccaaacgtgccgccgggt
gtaccttcaccgtcaacgggaccatttccacagacaccagggcttggaacgaatagcgga
ggtgtgacacagtcaacgccttttccaccaaatggcgtagcgccaggagattcgcacgtg
aacgcatcttcgcaccctccttcgaatccgaacacatcaacaaaccagaacacatcatca
cttcaaaacagcgcagtatcgcatcatcctcatccgcagacgccggcgcaacaagtactg
ataagtccagcagatagatggggactcctagggttgctggaaatgatcaagaatgccagt
tcagatgtggacgggggacttagtagtatggggactgacctgggtaccatgggcttggac
atgaattatccagggagtctgtatcaaacattcattacaccttgggcggatcagtcagcg
gcacactcagtagaaccagacttcaacctgcctgcttgctacctaagtgtacaagcagca
gcaccagggcttttaaaagcgtcagcgtttagtgacgagacgcttttcttcatgttctat
tcgagtccacgagatgccctacaggaagtggcggcgcaagaactcttcaaccgtaactgg
cgctatcacaaagaactccgactctggatcacgaaggaaaccggcacaacaccttcacag
aaagtacaaggaggcgaacaaggacaatacactttctgggaccctgaaaattggtgcaag
gagagaaaggaaatgacggtgctatatgtcgacctggaagaaaagagccaaccggcgttt
gcgaactcgcagagcctggtgccggcaaatcaaagccagaatgcccctcagcagcagcag
cagcagtctgtacaggctcagctgaatgcacaagtacaagcaacacaacgaggagcttca
ttccaaatggggatggcgagtttgtga
DBGET
integrated database retrieval system
