Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT113788
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Entry
AGABI1DRAFT113788 CDS
T03136
Symbol
AGABI1DRAFT_113788
Name
(RefSeq) hypothetical protein
KO
K12855
pre-mRNA-processing factor 6
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI1DRAFT113788 (AGABI1DRAFT_113788)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abp03041
]
AGABI1DRAFT113788 (AGABI1DRAFT_113788)
Spliceosome [BR:
abp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
AGABI1DRAFT113788 (AGABI1DRAFT_113788)
Complex C
U5 SnRNP specific factors
AGABI1DRAFT113788 (AGABI1DRAFT_113788)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP6_TPR
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_16
HAT_PRP39_C
Suf
TPR_2
TPR_8
ARM_TT21_N
TPR_6
HAT_Syf1_CNRKL1_C
TPR_11
ARM_TT21_2nd
TPR_CcmH_CycH
FAT
TPR_21
Thioredoxin_3
Motif
Other DBs
NCBI-GeneID:
18824112
NCBI-ProteinID:
XP_007329932
JGI:
Agabi_varbur_1_113788
UniProt:
K5XVK4
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MAAKNKSNKLAFLSMPAPASYVAGLGRGASGFTTRSDIGPAREGPSEEVIAEARARRGEE
EVDPEQFQDPDNEYGLFAGMTYEQDDEEADKIYDKVDQAMDSRRKARREAREQGELAKHR
AERPKIQQQFADLKRGLSAVTDSEWDSIPEVGNLTRKKRRKEDRSFVVPDSVLVGDRAKG
EFENALDSRQQEVGGFVTPADSGILTDFVEIGQARDKILSLKLDQISGTTSTSGTSTSVD
PKGYLTSLDSVVIKSDAEIGDIKRARMLFDSLVKSNPKHAPGWIAAACLEEHAGRMVAAR
KIIKTGCENCPKSEDVWLEAARLHNNNDAKIIFSNAVQHVPQSVKIWLAAADLESDPKAK
KRVLRRALEHIPNSVRLWKETVNLEESATDARVLLARATEVIPLSVELWLALARLETPAN
AKKVLNSARKAVPTSHEIWIAAGRLLEQEANTPEKSSDLKTKELAAVDNTIELAVRELRK
HGVLLTREQWLKEAEQCESQGSIRTCEAIVKATVAMEVEEEDRLDTWVSDAEGAESKGMV
GTARAILAYALKVYPDRRNLWRRAAELEKMHGTRESLDALLSQAVKHCPQAEVLWLMAAK
EKWLAGDVEAARVVLERAFNVNPESEEIWLAAVKLESENGNMDVARQLLQRARDVADTDR
IWMKSAVFERQLGQYADALQTLETALTKFPKFPKFYIMQGQIHQKLKNITAARKSYATGM
KACPKSITLCILASRLEEADGKSIKARALLERARLVNPANDELWAESVGVEERSGSSVQA
KAMLSRGLQECPTSGLLWSLSIWSEPRPMRKTRSVDALKKSADNPIIICTVARLFWAERK
IEKARHWFSRAVATAPDLGDTWGWWLKFERMHGVEEQREEVRKKCIAAEPHHSPVWQSVA
KDDANRGRSVGEILEMVAAALQ
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaaaaacaaatccaacaaattggcgtttttgtcaatgccagcaccagcctct
tatgttgctggtcttggtcgaggtgcttctggttttacaactcgttcggatatcggcccc
gctcgagaaggtccttcagaggaagtcattgctgaagccagagctcggcgaggagaagaa
gaagtggatcccgaacagttccaagacccggataatgaatatggtctttttgctggaatg
acatatgaacaagatgacgaagaagccgacaagatatacgacaaagtcgatcaggctatg
gactccaggcggaaagcaaggagggaggcgcgtgaacaaggggaactagcgaaacaccga
gcggaaaggccgaaaattcaacagcagttcgccgacttgaaacgaggtttatctgccgtg
acggattccgagtgggatagtataccagaagttggaaacttgacgagaaagaagcgtaga
aaagaagatcggtctttcgtggtgccagacagcgtgcttgtaggtgatagagcaaaggga
gagtttgagaatgctttagattcaaggcaacaagaggttggcggtttcgttacacctgcc
gactctggtattcttacagactttgttgaaatcggtcaagcccgagacaagattctttcc
ctcaagcttgatcagatatccggtacgacctctacatcgggcacttccacgtctgtcgac
cctaaaggttatttgacctccctcgatagcgtcgtgatcaaatccgatgctgaaataggc
gacatcaagcgtgcacgcatgctctttgactcactcgtcaaatccaaccccaagcatgct
cctgggtggatcgctgctgcatgtttagaagaacatgccggccgcatggttgcagctcgt
aaaattatcaaaacagggtgcgaaaattgtccgaagagtgaggatgtgtggttggaagct
gcgcgtctacacaataacaacgatgcaaaaatcattttctcaaacgcagtccaacatgtt
ccgcaaagtgtgaagatatggctggcggctgcggatttggaaagcgacccgaaagcaaag
aagagagtcttacgaagagcccttgagcacataccaaactcagtacggctctggaaagaa
accgtcaacttggaagaatcagcgaccgatgctcgagttctccttgcacgtgctacggaa
gttatacccttgtctgtcgagctgtggcttgcactagcgcgactcgaaacaccggcgaat
gccaaaaaagtcctcaactcagctcgaaaagcagttccaacgagccacgaaatttggata
gccgccggtcgcttactcgagcaagaagctaacactccagaaaaatccagtgatttaaag
accaaggagcttgccgctgtcgacaatactatcgagctcgcagttcgtgagctccgtaaa
cacggtgtcctcctcacccgtgagcagtggctcaaagaagccgaacaatgcgaaagtcaa
ggaagcataaggacatgtgaagcaattgtaaaagcgacggtggctatggaagtggaggag
gaagatcgactggatacttgggttagtgatgctgagggtgcggaaagtaagggtatggta
gggaccgcaagggcgatcttggcatatgcattgaaggtttatccggatcgaagaaatttg
tggaggagggcggctgagctggaaaagatgcatggtacaagggagagtttggatgctttg
ctcagtcaagcagtgaagcactgtccacaggcggaagtgctttggctaatggctgcgaag
gagaaatggcttgctggagatgtggaagctgctcgtgtagtcttggaacgcgcattcaac
gtcaatcctgaaagcgaagaaatctggttggccgctgttaaattagagtcagagaacgga
aatatggatgtcgcaagacagctcctacaacgcgccagggatgttgcagatactgatagg
atttggatgaaatcagcagtgtttgagcgacaactcggtcaatacgcggacgcacttcaa
accctcgaaacagccctcacaaagtttcccaagttccccaaattttacataatgcaaggt
caaatccatcagaaactcaaaaacattactgccgcacgaaaatcgtatgctaccgggatg
aaagcttgtccgaagagtatcacactttgtatattggcatcacggttggaagaagctgat
gggaagagtatcaaagctcgtgcgttgcttgaaagagctcgacttgtgaatcccgcgaac
gatgaattatgggctgaatcggtgggagtagaagaacgatctggtagttcagtgcaggct
aaggcgatgctatctcgtggacttcaggaatgtcctacctctggacttctttggtcccta
tccatctggtctgaacctcgacctatgaggaagactcgttcggtcgacgcgttgaagaag
agtgctgacaatcccatcattatatgtactgtggcaaggttgttttgggcggaaagaaaa
attgaaaaggcgagacactggtttagtagggcagtggcgactgcgccagatttgggagat
acatggggttggtggttgaagtttgagagaatgcatggagtggaagaacagagggaagaa
gtgaggaagaagtgcatagctgccgaaccacatcattcaccagtgtggcaaagtgtggcg
aaagatgatgctaacagggggaggagtgtcggggagattttggagatggttgcggctgcg
ctgcagtga
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