Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT114047
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Entry
AGABI1DRAFT114047 CDS
T03136
Symbol
AGABI1DRAFT_114047
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03030
DNA replication
abp03420
Nucleotide excision repair
abp03430
Mismatch repair
abp03440
Homologous recombination
abp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AGABI1DRAFT114047 (AGABI1DRAFT_114047)
03420 Nucleotide excision repair
AGABI1DRAFT114047 (AGABI1DRAFT_114047)
03430 Mismatch repair
AGABI1DRAFT114047 (AGABI1DRAFT_114047)
03440 Homologous recombination
AGABI1DRAFT114047 (AGABI1DRAFT_114047)
03460 Fanconi anemia pathway
AGABI1DRAFT114047 (AGABI1DRAFT_114047)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
abp03000
]
AGABI1DRAFT114047 (AGABI1DRAFT_114047)
03032 DNA replication proteins [BR:
abp03032
]
AGABI1DRAFT114047 (AGABI1DRAFT_114047)
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT114047 (AGABI1DRAFT_114047)
Transcription factors [BR:
abp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
AGABI1DRAFT114047 (AGABI1DRAFT_114047)
DNA replication proteins [BR:
abp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
AGABI1DRAFT114047 (AGABI1DRAFT_114047)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
AGABI1DRAFT114047 (AGABI1DRAFT_114047)
MMR (mismatch excision repair)
AGABI1DRAFT114047 (AGABI1DRAFT_114047)
DSBR (double strand breaks repair)
HR (homologous recombination)
AGABI1DRAFT114047 (AGABI1DRAFT_114047)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
18824196
NCBI-ProteinID:
XP_007330139
JGI:
Agabi_varbur_1_114047
UniProt:
K5XWA8
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MNEYRLSVGCCEDMQNASNIDDDVFLREHVVQFLSVKKVNATGGAGDRYRLIISDGKYYI
QAMLATQCNSLVETDQIKKFSVAAIERASSNTVQGKRLVIVLSLRILGYPNEKINNPQAL
DPVNSGPDQNASAEAPPAPAPGGSRQVNKPNTSGVATFPIENLSPYQNNWTIKARVTQKS
DIKNWSNSRGEGKLFSVTLMDDSGEIKATAFNSVVDELFPRLEDSKVYYISKARVNFAKK
KFSNVTNDYELTLERSTQITECHETTGLPEMRYTFVGLEKLENLNKDAICDVIGVLKDIS
AVSEITARTTNRSFQKRELTLVDKSGCSIQLTLWGKQAESFTGEPGSIGAFKGVKVGDFG
GVSLSTTPSTHIQLDPHIQDCYTLRGWWDSQGSDMSFQSKTVIGGGGGLGIAFNRAQVRS
LNEIKEAEVGMGDKADTFCCQGTIVHIRDQNLLYPACPGNNCNKKMSMSGDTWVCDKCGT
NAETPEYRYILSMAVADWSGQAWLQGFNEAAVIVFGMSGNELYDLKMRDEDKYNAVIHKA
HCQTYNFACRAKKDSYEDRVRIRYGISRIEKVDYHAEAQYLRDLLRSPWAA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagtacaggctctccgttggctgttgcgaggacatgcaaaatgcctccaacatc
gacgacgacgtctttctcagagagcacgtcgttcagtttctttccgtcaagaaagtcaat
gcaactggtggtgccggcgatcgctaccgtctgattatctcagatggaaaatattacatc
caagctatgctggctacccagtgcaactccttggttgagaccgaccagatcaaaaagttc
agcgttgctgccatcgaaagggcttcgtcaaacactgtccaggggaaacggttggtcatt
gtcctcagtttacgcatcctcggatatccgaacgagaaaatcaacaaccctcaggccctc
gatcctgtcaactctggtccagaccaaaatgcgtctgcagaggcaccaccagctccagct
ccgggcggcagccgtcaggtaaacaagccaaatacctctggcgtggcaactttcccgatc
gaaaacttgagcccgtatcagaacaactggaccatcaaggctcgagttactcagaaaagt
gacatcaagaactggtctaattcaaggggcgaaggcaaactcttcagtgttacgcttatg
gatgacagtggggagatcaaagccactgccttcaattccgttgtcgatgaactcttccct
cgattggaagacagcaaagtctattacatctcaaaagctcgcgtcaacttcgccaagaaa
aaattcagcaacgtgacgaatgattacgagttgacccttgagaggtccactcagatcaca
gaatgtcacgagacaactggattacctgaaatgaggtacacgtttgttggtcttgagaag
ctcgaaaacctcaacaaagatgcaatctgcgatgtcattggcgtactcaaagatatcagc
gccgtttctgaaatcacagctcgaacgacaaatcgatctttccaaaaacgagaacttact
ctagttgacaagagcggttgctcaatacaattaacattatggggtaaacaggcagagtcg
ttcacgggtgaaccgggctccattggtgccttcaagggcgtcaaagtcggtgactttggg
ggtgtttcattatccacgacgccctcgactcatatacaactggatcctcacatccaggat
tgttacacccttcgcggctggtgggactctcaaggctccgacatgtctttccaatccaag
actgttattggaggtggtggtggtctcggaattgctttcaaccgtgcccaagttcgtagt
ctgaacgaaatcaaagaagccgaggtgggcatgggagataaggccgatacattctgttgt
caaggaacaatcgttcatatcagagaccaaaaccttctttaccctgcctgcccaggtaac
aattgtaacaagaaaatgagtatgtcgggtgatacttgggtgtgtgataaatgtggtacg
aacgcggagacgcctgaatatagatatattctttctatggctgttgccgactggtctggc
caggcatggctccagggatttaatgaagccgcagtgatagttttcggtatgagcggaaat
gagctctacgatttgaagatgcgggatgaagacaaatataacgccgtcattcacaaggcc
cattgtcaaacatataatttcgcatgtcgcgccaagaaagattcatatgaagatcgcgtt
cgtattcgatatggtatttctcggatagagaaagtcgattatcatgcagaagcccaatat
ctacgagacttgcttcgtagtccttgggctgcatag
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integrated database retrieval system
