Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT114134
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Entry
AGABI1DRAFT114134 CDS
T03136
Symbol
AGABI1DRAFT_114134
Name
(RefSeq) hypothetical protein
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03030
DNA replication
abp03410
Base excision repair
abp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AGABI1DRAFT114134 (AGABI1DRAFT_114134)
03410 Base excision repair
AGABI1DRAFT114134 (AGABI1DRAFT_114134)
03450 Non-homologous end-joining
AGABI1DRAFT114134 (AGABI1DRAFT_114134)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abp03032
]
AGABI1DRAFT114134 (AGABI1DRAFT_114134)
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT114134 (AGABI1DRAFT_114134)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
abp04147
]
AGABI1DRAFT114134 (AGABI1DRAFT_114134)
DNA replication proteins [BR:
abp03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
AGABI1DRAFT114134 (AGABI1DRAFT_114134)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
AGABI1DRAFT114134 (AGABI1DRAFT_114134)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
AGABI1DRAFT114134 (AGABI1DRAFT_114134)
Exosome [BR:
abp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AGABI1DRAFT114134 (AGABI1DRAFT_114134)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
18824218
NCBI-ProteinID:
XP_007330247
JGI:
Agabi_varbur_1_114134
UniProt:
K5VYT3
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MGIKGLTGLISQLAPAAIREHEIKTLFGRKVAIDASMSIYQFLIAVRQKDGEMLSNDAGE
TTSHLMGFFYRTIRIVENGIKPAYVFDGKPPELKKGVLSKRFERREEAKEEGEEAKETGT
VEEVDKLSRRTVKVTKEHNAECIRLLKLMGIPVVVAPSEAEAQCAELARGGKVYAAGSED
MDTLTFNAPILYRHLTFSEAKKQPISEINLEAALKGLEMNMSQFIDLCILLGCDYLEPIR
GVGPKSALKLIREYGSLGKIIAHLREKEADKKAAAQSADEAEDEPAPTSDAEPAEDEPKK
KPKKGKGKGAGGIKVPEDWPWEEAKKLFENPDVVPADQLELEWNNPDVDGLVQFLVQEKG
FNEERVRKGAEKLQKFLNTKQQGRLDGFFSVKPKDKPAPATKSDSKTKGTKRKAGSGKKT
KRK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcaaagggcttacagggctcatctcacagcttgctccagcagcaatcagagaa
catgaaataaaaacactctttggccgcaaagtggccatagacgcatccatgtcaatatac
cagtttctcatcgccgtccgccagaaggatggtgaaatgctctcaaacgatgccggcgag
actacgagccatcttatgggatttttctatcgcacaatacgcatcgtcgagaacggtatc
aaacccgcatatgtctttgatggaaaaccgcccgagttgaaaaagggagtgctttcgaaa
cgatttgagcgacgcgaagaggcaaaagaggaaggtgaagaagcaaaagagacgggaacg
gtggaggaggtcgacaagctatcaagacgaacagtgaaggtgactaaagagcataatgca
gaatgcatcaggctcctcaagctcatgggcatccctgtagtagtggcaccctctgaagca
gaagcgcaatgcgctgagcttgctcgtggtggaaaggtgtatgcggccggttcggaggat
atggatactttgactttcaacgcccccatcctctatcgacatctgacgttttcagaggcc
aaaaaacagccaattagtgaaataaacctcgaagccgctttgaagggcctggaaatgaat
atgagccaattcatcgatttgtgtattcttcttggttgtgactacctagaaccaatcagg
ggcgtgggccccaagtctgctctcaaactcattcgagaatacggaagcctaggcaagatt
atcgctcatctaagagaaaaggaagcggataagaaagcagcagcacaatcggcagacgag
gccgaggatgaacctgcccccacatcagatgctgaaccagctgaagatgaaccaaagaag
aaacccaagaaaggtaaaggcaagggagcgggagggatcaaggtgccggaggattggcca
tgggaagaagcgaaaaagctgttcgagaaccccgatgtggttcctgcagatcaattagag
ctcgaatggaataatcccgatgttgatggcctcgttcaattcctcgtgcaggaaaagggg
tttaatgaagaaagagttcgtaaaggtgccgagaaactgcaaaagtttttgaacaccaaa
cagcaaggtcgacttgatggtttcttttctgtcaagcccaaagacaagcccgcaccagcg
acaaagtctgattcgaaaacgaaaggaacaaagcggaaggctggctcgggaaaaaagacg
aaacggaaataa
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