Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT114403
Help
Entry
AGABI1DRAFT114403 CDS
T03136
Symbol
AGABI1DRAFT_114403
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03030
DNA replication
abp03410
Base excision repair
abp03420
Nucleotide excision repair
abp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AGABI1DRAFT114403 (AGABI1DRAFT_114403)
03410 Base excision repair
AGABI1DRAFT114403 (AGABI1DRAFT_114403)
03420 Nucleotide excision repair
AGABI1DRAFT114403 (AGABI1DRAFT_114403)
03430 Mismatch repair
AGABI1DRAFT114403 (AGABI1DRAFT_114403)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abp03032
]
AGABI1DRAFT114403 (AGABI1DRAFT_114403)
03036 Chromosome and associated proteins [BR:
abp03036
]
AGABI1DRAFT114403 (AGABI1DRAFT_114403)
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT114403 (AGABI1DRAFT_114403)
DNA replication proteins [BR:
abp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
AGABI1DRAFT114403 (AGABI1DRAFT_114403)
DNA Replication Termination Factors
ELG1-RFC complex
AGABI1DRAFT114403 (AGABI1DRAFT_114403)
Chromosome and associated proteins [BR:
abp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
AGABI1DRAFT114403 (AGABI1DRAFT_114403)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
AGABI1DRAFT114403 (AGABI1DRAFT_114403)
Check point factors
HRAD17(Rad24)-RFC complex
AGABI1DRAFT114403 (AGABI1DRAFT_114403)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
AAA_assoc_2
AAA_22
AAA_16
Rep_fac_C
Motif
Other DBs
NCBI-GeneID:
18824322
NCBI-ProteinID:
XP_007330615
JGI:
Agabi_varbur_1_114403
UniProt:
K5XUP0
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MSLWVDKYRPKNLQELHYHHALSKRLKSLASGDFPHILFYGPSGAGKKTRIACTLREIYG
PGAEKLKIDQRIFLSPSRRKLEINLTQSNYHIEITPSEAGNYDRVVIQEILKEIAQTQQV
DLNAKQRFKIVVINEADSLSRDAQAALRRTMEKYMSNMRIILCANSTSRLIAPIKSRCLL
VRVAAPNADEMAAVLNSVAGRENFQLPEEAARQIVEDSNGNMRKALLVMEALKMQSPNLT
GPLTIAKPDWETYCHKVADLIVSEQSPSRIMEVRNKFYELLSHCIPPTVILKTVAERVVE
RVDESLKADIMHWAAFYETRMRIGNKKIYHLEAWVVKVMSLYKQFFYGFDMSSFD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctttgggtggacaagtaccgtcccaaaaacctccaggagctccattaccaccat
gcattatcaaagcgtttgaagtcattggcctctggggattttccacatatactattctat
ggtccttccggcgcgggcaaaaagactcgtatagcttgcacgctgagagaaatctacggg
cctggagccgaaaaactaaaaatcgaccaacgaatctttctttcgccttctcgccgtaaa
ctagagatcaatttgacccagagcaattaccacattgagatcacgcccagtgaagccgga
aattatgaccgagtcgttatccaagagattctgaaagaaatcgcgcaaacacagcaggtt
gacttgaacgccaaacaacgtttcaaaattgttgtcataaacgaagcggattcgctttcg
cgagatgctcaagctgcacttcgacgaacgatggaaaaatacatgtcgaacatgcgaatt
atactttgtgcgaacagtactagccgtctaattgctccgatcaaaagtagatgtctattg
gtacgagtagcggcaccgaatgcggacgagatggccgctgtactcaactccgttgctggc
cgagaaaattttcaattacctgaggaagcagcaagacaaattgttgaagattcaaatggg
aacatgagaaaagcacttttggttatggaagccctgaaaatgcagtcaccaaatctgaca
ggcccactgacaatcgcgaaaccagactgggaaacctattgccataaggttgctgatctg
atcgtttctgaacaatctccctcccgaataatggaagtccgcaacaagttttatgaactg
ctaagtcactgcattcctcccacagtgatcctcaagactgtcgccgagcgcgttgttgaa
cgcgtggatgagagtctgaaagccgatatcatgcattgggcagctttttacgaaacgagg
atgcgaattggaaacaagaagatctatcaccttgaagcttgggtggtcaaagtgatgagc
ctctacaagcaattcttctatggttttgacatgagcagtttcgattag
DBGET
integrated database retrieval system
