Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT114691
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Entry
AGABI1DRAFT114691 CDS
T03136
Symbol
AGABI1DRAFT_114691
Name
(RefSeq) hypothetical protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AGABI1DRAFT114691 (AGABI1DRAFT_114691)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT114691 (AGABI1DRAFT_114691)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
AGABI1DRAFT114691 (AGABI1DRAFT_114691)
U7-dependent histone pre-mRNA processing factors
AGABI1DRAFT114691 (AGABI1DRAFT_114691)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
Motif
Other DBs
NCBI-GeneID:
18824429
NCBI-ProteinID:
XP_007331062
JGI:
Agabi_varbur_1_114691
UniProt:
K5XTM9
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MSKVVFVGNVPYNMGEDQLIDVFKSVGQVIGFRLVFDRETGKPRGYGFCEFADNETALSA
VRNLNNVDVGGRPLRIDLADSDPFLEGKTTVRGELVDGGYPGPAEPRQRGGGRGHDGDFL
SQVPLGVPIPKGTKALDHISTTLAKMQPSQLMEVLAQMKAFIITHPDQARQLLVKHPQLS
YALFQGLLLNNIVDPAILQRMLEQTASQQMNPGTTSTPPRPPMPPHLSQQSPFVPPPSHM
SYQAPAPMSGLPPPSSLPPASAMFPTTGVPYYRPPPPAAAPQAPAPPVAAQQPAATPAIN
ENQRAMLMQVLALTPDQISGLPESEKAAIMQLRTQFGKITT
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtagtttttgttggaaatgtgccatacaacatgggtgaagaccagcttatt
gacgtatttaaaagcgtcgggcaagttataggattcaggctggtctttgaccgggaaacg
ggtaaacctcgtggatatgggttttgcgagtttgctgacaatgaaactgcgctgagtgct
gttcgaaacctcaataatgttgatgttggtggacgaccgctaaggatcgacctggcggac
tctgatccatttcttgaaggcaaaacaacagtccgtggtgaattagtagatggtggatat
cctggacctgcggaacctcgacaacgcggcggaggtcgtggacacgatggcgacttccta
tctcaagttcctctcggtgtccccattccaaaaggaacaaaagcattggaccatattagt
acaactctcgcaaaaatgcagcctagccaactaatggaggtcctggcccagatgaaggca
ttcatcatcacgcatcccgaccaagcacgtcaacttcttgtcaagcatcctcagctatct
tacgcgcttttccaaggtctgctgctgaacaacatcgttgatcctgcaattctacaacga
atgcttgagcagaccgcgtcacagcagatgaatccggggacaacttcaacgcctccgcgc
ccgccgatgcctcctcatttatctcaacaatctccattcgtccctcctccatctcacatg
tcataccaggcgccagcacctatgtctggattgcctccgccttcatcgctgccgcccgca
tcagcaatgttccctaccacgggcgttccgtattatcggccaccgcctcctgctgctgca
ccgcaagcccccgcaccacctgtagcagcccaacagcctgccgcaacgcccgcaataaat
gaaaaccaaagggccatgctcatgcaagtgcttgctttgacgccagatcaaattagcgga
cttccggagagcgagaaggcggcgataatgcaactgcgtactcaatttggcaagataact
acatag
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integrated database retrieval system
