KEGG   Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT115023
Entry
AGABI1DRAFT115023 CDS       T03136                                 
Symbol
AGABI1DRAFT_115023
Name
(RefSeq) hypothetical protein
  KO
K03872  elongin-C
Organism
abp  Agaricus bisporus var. burnettii JB137-S8
Pathway
abp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:abp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    AGABI1DRAFT115023 (AGABI1DRAFT_115023)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:abp04121]
    AGABI1DRAFT115023 (AGABI1DRAFT_115023)
   03400 DNA repair and recombination proteins [BR:abp03400]
    AGABI1DRAFT115023 (AGABI1DRAFT_115023)
Ubiquitin system [BR:abp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     AGABI1DRAFT115023 (AGABI1DRAFT_115023)
   Cul5 complex
     AGABI1DRAFT115023 (AGABI1DRAFT_115023)
DNA repair and recombination proteins [BR:abp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     AGABI1DRAFT115023 (AGABI1DRAFT_115023)
SSDB
Motif
Pfam: Skp1_POZ AAA_assoc_C
Other DBs
NCBI-GeneID: 18824564
NCBI-ProteinID: XP_007331605
JGI: Agabi_varbur_1_115023
UniProt: K5XS56
LinkDB
Position
Unknown
AA seq 114 aa
MQNQASTPAPENNDWVRITSIDGYSFIVRRKIAKASGTMKSMLDMSSSYAEAATKTCPSG
QRAIIAEKLIEYMSFKAHYETVGPKEDIPLHEFMERLPREIVLELLVAADYQEM
NT seq 345 nt   +upstreamnt  +downstreamnt
atgcagaatcaagcgagcacaccggcaccggagaataatgattgggtccgcatcactagc
attgatggctattcttttatcgtacggcgaaagattgccaaggcaagcggaacaatgaag
agcatgctagacatgtcaagcagttacgcggaagcggcaaccaagacgtgtccttctggt
caacgagctattatagctgaaaagctaattgaatatatgagcttcaaagcccattacgag
accgttggaccgaaggaggatatcccactacatgagtttatggagcgtctacccagagag
atcgtattagaattattggtcgcggctgactaccaagaaatgtaa

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