Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT116933
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Entry
AGABI1DRAFT116933 CDS
T03136
Symbol
AGABI1DRAFT_116933
Name
(RefSeq) hypothetical protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AGABI1DRAFT116933 (AGABI1DRAFT_116933)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abp03009
]
AGABI1DRAFT116933 (AGABI1DRAFT_116933)
Ribosome biogenesis [BR:
abp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
AGABI1DRAFT116933 (AGABI1DRAFT_116933)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_RSE1_2nd
Beta-prop_TEP1_C
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_DCAF4
BAT
Motif
Other DBs
NCBI-GeneID:
18825285
NCBI-ProteinID:
XP_007325377
JGI:
Agabi_varbur_1_116933
UniProt:
K5W977
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
MSEDERERKDSHATSFAVHRCRFVDYAPSAVTALAFPPSPLPTVNRARRKTTGKKPLRYG
TLAVGHANGNIDLCEWVGSERSVQCSQAWVVRKTMPGPYPSKVDSLTFVIRYPDDLDSDD
IPSVSDLRLFSSGGGSELLEWNLDLSCVKRTIGSQGGTIWCVAANPASTFLALGCEDGSV
QLLSVANDTLTHHSRFDRVSGRILSIAWGPPVPQPKSQSSNEDDADSDSEDEDEWKDEWL
VTGCSDSSLRKWDARTGRPLQRMAVDKIRGERTLVWAVGILGDGTIVSGDSLGNVKFWDP
RTCTQLHSFQAHGADVLTLTINPEGKSVYTSGVDQKTVQFSLVQTNSSSSTSGRWAQTAS
RRMHAHDVRAQVSWPPYTPLPKAYKRTYPMDIAPILASGGLDMSIVLSPAALPESTVTKV
INPLVTSTDATFGDAYHRRITYTVGNAIRVSRKQRLMLCLREAGLSVWRILKKPQDEMVD
QLEVDEPEPWNGGWEKILDMELKVTGNLVAGEISEDGRWLAVSDMYEAKLFSLCSDDNGK
VSVKRIKGFPSLIYSSIPNASSRTSLGAITLRFTPDSSKLVLCTAQTSYILILDLTHETP
RLIRRFEHHRLKETVVGDRVVKSLKQPKQLNGVLINGNHAEGEDVDMEDAEASVSGEATS
GGEDSDGDDDPNLTTDTIPSILRITISPDGQWLATSDDQRHTHIFNLDSISHHCLLPTFP
LHVSCFAFSPANPNVLFLAFPDNTLQVYDAEARQFPSWSKNLSLSSFSPSPIAKKLVTLH
DAILGISFPPPPLLAVSDDMDPTKKDTQQKEVDGGKSPYALLWGANWLIKLPLSLSTTGG
HSKFSRKRKSPQQDQADTQTTTEESLTNASSRLVTHYRPILHVDFLDDGELVIVERPLVD
VLRTLPPAYFKHKYGSS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggatgagcgcgagcgcaaagatagtcatgcaacaagcttcgccgtccaccgg
tgccgctttgtcgattacgcaccttctgcggtcacggcactcgcgttcccgccctcgcca
ttacctacagtcaatcgcgcaagaagaaaaacaacggggaaaaagccattgcgatacggg
actcttgctgttgggcatgcaaatggaaatatagatttgtgtgaatgggttggctccgag
cggagtgtgcaatgttcacaagcttgggttgtcagaaagacaatgccaggtccttacccc
tcaaaagttgactctctaacttttgtaattcgctatcctgatgatcttgattcggatgac
atcccttcggtatcagacttgcgattgttcagctctggaggaggaagtgaactgctcgaa
tggaatctcgatctttcttgtgtgaagagaacaattggttctcagggtggcacaatctgg
tgtgtagcagccaacccagcatccacctttcttgcattgggttgtgaagatggatcagtt
caattactttcagtggcgaatgatactctcactcatcatagtcgctttgatcgggtttct
ggtcggattcttagcattgcttgggggccacctgtgcctcagcccaagtcccagagttca
aatgaagacgatgctgacagtgattctgaagatgaagatgaatggaaagatgaatggctc
gtaacgggttgttcagatagcagtcttcgaaagtgggatgcgcgaaccggcagaccactt
caacgtatggcagtggacaagattcgaggtgaacggacacttgtttgggctgttggaatt
ctgggtgatggcaccatcgtctcaggcgattctctggggaatgttaaattctgggatcca
cggacatgcacacaattacattcctttcaagctcatggcgctgacgttctcactctcacc
atcaacccggaaggcaaatcagtttatacatctggggtagaccaaaagactgttcaattc
tcacttgtccagacaaattcatcgtcatctaccagcggtcgttgggcgcaaactgcatcc
cgtcgtatgcacgcgcatgatgtacgtgcacaggtatcatggccaccatacacacccctt
cccaaggcgtataaacgcacttatcctatggacattgcaccaattctcgcttctggaggt
cttgacatgtctattgttctcagccctgcagcccttcctgaaagtactgtgacaaaagtt
attaatcccttggttacaagtacggatgccacttttggtgatgcatatcatcgtcgtatc
acctataccgttggcaatgccattcgtgtgtcgagaaaacaaagattaatgttgtgcttg
agagaggcagggttgagcgtttggcgaatcctaaagaaaccccaggatgagatggtggat
caattagaggtagatgaacctgaaccttggaatggaggttgggagaagatactggatatg
gagctcaaagtgacgggcaacttagtcgctggagaaatctctgaagatggacgatggtta
gcggtctcagatatgtatgaggcaaaactgttttcactgtgctcagatgataatggcaaa
gtttcagtaaaaagaatcaaaggctttccctccctgatttattcaagtattcccaatgcc
tcctcgagaaccagtctcggtgctatcacattacgattcacaccggactcttcaaagctc
gttttgtgcaccgcgcaaacatcttacatcctcattcttgaccttactcacgagacacct
cggctcatcagacggttcgagcaccacaggctaaaggaaaccgttgttggagaccgcgtc
gtaaaatctctcaaacaaccaaaacaactgaatggcgtcttgatcaatggcaatcatgca
gagggagaggatgtagacatggaagatgccgaagcaagtgttagtggagaagccacaagt
ggaggagaagatagcgatggcgacgacgatccaaatttaacaacggataccatacccagc
atcttacgaataactatcagtccagatggacagtggctagccacctctgacgaccagcgg
catacgcatatattcaacttggactcgatttcccaccactgtctccttcctacattcccg
ctccatgtatcatgcttcgccttttcgccagcaaatcccaatgttctcttccttgccttt
ccagataatacattacaagtctatgacgcggaggcccgtcaattcccatcatggagtaaa
aacttatcactgtcctcattttcaccttctccaattgccaaaaagcttgtgacgctccat
gatgccatccttggtatctcttttcctccccctcctctactggctgtttcagatgacatg
gaccccacgaaaaaagacacgcaacaaaaggaagtcgatggagggaaatcgccttatgcc
ttgttgtggggtgccaattggttgattaaacttccattatcgttatctaccaccggtggt
cattcaaaattcagtagaaagcgaaaatctccgcaacaagaccaagccgatacacagaca
acgacggaggagagtctgaccaatgcttcgagtaggctggttacacattatcggcctatc
ctgcatgttgatttccttgacgatggagaacttgtgatcgttgagcgacctcttgtcgac
gtactcagaacactacctcctgcttatttcaagcacaaatacgggtcatcatag
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