Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT117335
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Entry
AGABI1DRAFT117335 CDS
T03136
Symbol
AGABI1DRAFT_117335
Name
(RefSeq) hypothetical protein
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abp03041
]
AGABI1DRAFT117335 (AGABI1DRAFT_117335)
03009 Ribosome biogenesis [BR:
abp03009
]
AGABI1DRAFT117335 (AGABI1DRAFT_117335)
Enzymes [BR:
abp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AGABI1DRAFT117335 (AGABI1DRAFT_117335)
Spliceosome [BR:
abp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
AGABI1DRAFT117335 (AGABI1DRAFT_117335)
Ribosome biogenesis [BR:
abp03009
]
Eukaryotic type
Pre-60S particles
Helicases
AGABI1DRAFT117335 (AGABI1DRAFT_117335)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SBP_bac_4HB
Motif
Other DBs
NCBI-GeneID:
18825326
NCBI-ProteinID:
XP_007325651
JGI:
Agabi_varbur_1_117335
UniProt:
K5WAF2
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MAADYVMTIDSEDEGGVDSIPKSAQDEANLNPEFIFDVAGDPYLEIASHTLAEDWVKSGS
KPVPISVDDIIARRRPILKRKKSEIEEDDEDSGNSVDEFSESQEDTESSAEGFDQAEDEA
DKAENGEEISESESDDDPLATSGDDSDNEEEEMDSEKVESSGDDDDSEDETQAEKDRKTA
FFDQEIPASKNTHNSFLSMNLSRPLMKAVTNLGFNKPTPIQASTIPVALLGKDVVGNAVT
GSGKTAAFMIPMIERLLFREKGKKAAAIRCLVLVPTRELAVQCYEVGTKLSIHTDIRLCL
VVGGLSLKSQEADLRSRPDIVIATPGRLIDHIRNSASFSLDALDILVIDEADRILSEGFS
DELTEIIKSCPRSRQTMLFSATMTDSVDELVRVSLEKPVRLFVDPKRTTARGLIQEFVRV
RAGKEAERSAMLVTLCRRTFKRRVIVFLRSKKLAHQMRIVFSLLGMKCEELHGDLSQEQR
LRALQLFRDDAVDFLMATDLASRGLDIKGVETVINYDMPTQLAQYLHRVGRTARAGRGGR
AVTLVGEADRKMLRAAIKHAAAEDQVRHRVLPTEALQHWSDKLVELKDEISHVLREEKEE
KQMLKAEMEVKKGQNLIEHQNEIFSRPARTWFQTGQEKKASQTISKNEHEQGSKPTQRPK
AAANTQKHSTTRKAKRRKIAMEEDRELGDGKAITAAIRSAK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagactatgttatgaccatcgactcggaagatgaaggtggggtggacagtata
cccaaaagtgcacaagatgaagccaatctcaatcctgaatttattttcgatgtcgctggt
gatccttaccttgagatagcaagccacactttggcagaggattgggtcaagtcgggctca
aaaccagttcctatctccgttgatgatattattgctcgacgcaggcctatcttaaaacgc
aaaaagtctgaaattgaagaggatgatgaagactctgggaattctgtcgacgaattttca
gagagccaggaagatacagagagtagtgctgaaggatttgaccaagcagaggacgaggca
gacaaagctgaaaacggagaagaaatttctgagagcgagtctgatgatgacccacttgct
acatctggagatgatagtgataatgaagaagaagaaatggactcggagaaagtcgaatcg
tcaggagacgatgacgactctgaagacgaaactcaagcagagaaggaccgcaagaccgca
tttttcgaccaggagatacctgcctcaaagaatacacataattcattcttgtctatgaac
ctctctaggcctctcatgaaagctgtaacaaatctcgggttcaacaagccgacaccaatt
caagcttcaacaatcccggttgctctgttgggcaaagatgtcgtcgggaatgctgttact
ggctcgggaaaaactgctgcatttatgatacctatgatcgaacgtcttctattccgggaa
aaaggcaaaaaagccgctgccattcgttgtcttgtcctggtacccactcgagaacttgcc
gtgcagtgctatgaagtgggtacaaaattatcaattcacaccgatatccgcctctgcctt
gttgtaggtggtctgtccttgaaaagtcaggaagcagatttacggtcgcgacccgacatc
gtcatcgccacgcctggccggctcattgaccatattcgcaactctgcttcattttctctc
gatgcccttgatatcttggtcattgacgaagcggatagaatcctgtctgaagggttttct
gacgagttaactgaaatcatcaagtcgtgtcctagatctcgtcagaccatgctgttctcg
gctacgatgactgactcggtggatgaacttgttcgcgtctccctagaaaaaccagtgcga
ttgtttgtggaccccaaacgtacaaccgcacgtggcctcatacaagagttcgtgcgcgta
cgagcagggaaagaggccgaacgctctgccatgctagtgaccctatgtaggcgaacattc
aagcgtcgggtgattgttttcctccgtagcaaaaagctggctcatcagatgcggatcgtt
ttcagtctgttgggcatgaaatgtgaagagctacatggggatttgtctcaagaacagcgc
ttgagagcacttcaactcttccgtgatgacgccgttgattttttaatggccactgatcta
gcgtcccgaggtctagatattaaaggcgtggagacggtaattaattacgacatgccaacc
caactcgcacaatacttacatcgagtgggtcggactgctcgtgcaggaagaggaggacga
gctgttacactggttggagaagcagatcgtaagatgctgagagccgctataaagcacgct
gctgccgaggatcaagtccgtcatcgtgtactaccaacagaggctttgcagcactggtcg
gataaactagtcgaattgaaggacgaaatttcccatgtcctacgcgaagagaaggaggaa
aagcagatgcttaaggcagagatggaagtgaagaagggacagaatctaatcgagcatcaa
aatgagattttttctcgtccagctcggacatggttccaaacgggccaagaaaaaaaagct
tctcagacgatcagcaaaaacgaacatgagcaaggatctaagccaacgcaacgcccaaag
gctgcagcaaacacgcaaaagcattccactacacgtaaggccaagaggcggaagattgca
atggaagaagatagggaattgggagatggtaaagccatcactgccgccatccgttctgca
aaa
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