Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT118329
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Entry
AGABI1DRAFT118329 CDS
T03136
Symbol
AGABI1DRAFT_118329
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abp03041
]
AGABI1DRAFT118329 (AGABI1DRAFT_118329)
Enzymes [BR:
abp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AGABI1DRAFT118329 (AGABI1DRAFT_118329)
Spliceosome [BR:
abp03041
]
Complex C
Other components
Complex C specific factors
AGABI1DRAFT118329 (AGABI1DRAFT_118329)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_30
HA2_N
AAA_19
T2SSE
Cas3-like_C_2
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
18825431
NCBI-ProteinID:
XP_007326809
JGI:
Agabi_varbur_1_118329
UniProt:
K5XHI8
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MPKFWKPGTAGPGSTLDRASEQEGSLVQSAPLHSQRERLPIHQHRSKLLYCVENYGVTIV
VGQTGCGKTTQLPQYLHEAGWTANGATIACTQPRRVAATSVANRVAAEVGTVLGDEVGYT
IRFEDVSSKEKTRILYMTDGMLFRETLIDPLLTRYSVIMIDEAHERSIYTDLLLGILKKI
RRKRPSLRLIVSSATLDATSFKDYFVASTSPDEATIVSLEGRMYPVELAYLQEPTADYVR
KAAEVAWNVNLQQGPGDILLFLTGREDIERCLEELSEMLPTLPRTASRLLPLALHAGLTT
EEQLRVFEPSERGSRKLIVSTNIAEASVTIEGIKYVIDSGFVKIRVYNPTTALASLLTVP
TSVASATQRAGRAGRTSPGICYRLYPESALGSMPFSTPPEITRTDMTTPILQMKSLGIDD
LMKFEWVSSPPAETVLRALEGLHAAGMIDDSGRLTHMGEQVAECPVDVAIARMLFKSKEL
KCGEEILTIASMTAVQDVFIIPEGAPGALAELERRKFTAEEGDHLTLLNAYNAFVKHGKS
SGWCKAHALSFRAMSRVVSIRAQLKKYMQRFNLPLESCEGDAKRLRVCLVSGYWRNGARW
MADGTYRSVRGNRVLNVHPTSVLFTRKPRSGWVVFHEMEETKKTQIRILTEIEPDWLLEH
GHEYRGS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagttctggaaaccaggcactgcaggccccggcagcactctcgacagagcctca
gaacaagagggctcgctcgtccaatctgcccccctccacagccagcgcgagcgtttgcca
atacaccagcaccgctccaagcttctctactgtgtggaaaactacggtgtcacaatagtc
gtcgggcagacaggttgcggaaagacaactcaactgccccagtacctgcatgaagccgga
tggaccgccaacggagccactattgcctgtacccagcctcgccgtgttgctgcaacttca
gttgccaatagagtagccgctgaagtagggactgtcttgggtgacgaggtggggtatacc
atccgattcgaggacgtcagtagcaaggagaaaactcgcattttatacatgacagacggc
atgcttttccgggaaaccctcatagaccctctccttacgcgctacagcgttatcatgatt
gatgaagcacacgagcgaagcatctacacagacttgttgcttggcatactgaaaaaaatt
cgcaggaaacgaccttctctccgcctcattgtctcgtctgcgaccctcgatgcaacatcc
ttcaaagattactttgttgcttcgacgtctccggatgaagcaaccattgtaagtctagag
ggccgaatgtatcctgttgaactcgcatatcttcaagaacccaccgccgattatgttcgg
aaagcagctgaagtagcctggaacgtcaatctccagcaagggccaggagacattcttctg
tttctgaccggtcgagaagatattgaacggtgtcttgaagaattatcagagatgcttcca
acgttgccccgaactgcttctcgcctacttcccctcgctctccatgctggtctgacaact
gaagaacagctgcgagtgtttgagccttcagagagaggtagccgaaagttgattgtgtca
accaacatcgcagaggcgagtgtcaccatcgagggcatcaaatatgttatagactctggt
tttgtcaagattcgtgtctataacccaacgactgcattggcttctctcctcacagtgccc
acgtctgtggcctcggctacccaacgagcgggacgagcggggcgtacctcacctggtatc
tgctataggctttacccagagtctgctctgggatccatgccattttctacccctccggaa
ataaccaggacggatatgacgacccccattttacagatgaaatctcttggcatcgacgac
ctaatgaaatttgaatgggtttcgtcgcctccagctgaaactgttttacgtgctttggag
ggtttgcatgcggcaggcatgattgacgattccggtcggttgacgcacatgggtgagcag
gtggcagagtgcccggtagacgttgctatcgctcgaatgctgttcaaatccaaggaactc
aaatgtggagaggaaatccttactattgcctcaatgacggcggttcaggatgttttcatc
attcctgagggcgctccgggtgctttagcagaactcgaacgtaggaagttcactgctgaa
gaaggggaccatcttacacttctgaacgcttacaacgctttcgtgaaacacggaaaatcc
tctggctggtgcaaagcgcacgccttgtctttccgtgccatgtctagagttgtatcgatt
cgcgcacaactgaagaaatacatgcaacgattcaatttacccctggaaagttgtgagggg
gacgctaaaaggttgagggtctgtctcgtttctggatattggcgaaacggtgccaggtgg
atggcagatggaacttataggtctgtgagaggcaacagggttctcaatgtccaccccact
tcggtgctctttacgcggaagcctcgatctggatgggttgtatttcacgagatggaggaa
acgaagaaaacacaaatacgtattttgactgaaattgaacctgactggttgctcgaacac
ggccatgagtaccgcggtagttag
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