Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT119115
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Entry
AGABI1DRAFT119115 CDS
T03136
Symbol
AGABI1DRAFT_119115
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03030
DNA replication
abp03410
Base excision repair
abp03420
Nucleotide excision repair
abp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AGABI1DRAFT119115 (AGABI1DRAFT_119115)
03410 Base excision repair
AGABI1DRAFT119115 (AGABI1DRAFT_119115)
03420 Nucleotide excision repair
AGABI1DRAFT119115 (AGABI1DRAFT_119115)
03430 Mismatch repair
AGABI1DRAFT119115 (AGABI1DRAFT_119115)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abp03032
]
AGABI1DRAFT119115 (AGABI1DRAFT_119115)
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT119115 (AGABI1DRAFT_119115)
DNA replication proteins [BR:
abp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
AGABI1DRAFT119115 (AGABI1DRAFT_119115)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
AGABI1DRAFT119115 (AGABI1DRAFT_119115)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_30
AAA_18
RuvB_N
NTPase_1
AAA_16
AAA_5
AAA_22
AAA_14
AAA_33
Motif
Other DBs
NCBI-GeneID:
18825530
NCBI-ProteinID:
XP_007327896
JGI:
Agabi_varbur_1_119115
UniProt:
K5XG25
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MAPKTNKSGKGGGKDIRTFFGGSQKSSGSGSAAYLTGCRSSKPINTDSDDEPIGPSKLTG
RMVLDGSEDENPRPPQKRKAPLRVDDDESREDSPPRKKASISSTKANVRKSVKPRKDEDY
EIEKSSSEEDFIDDEPDDIKTKVKRKSSSSKKEKATKSEPENKKVAPTKAAAKPKSANLH
LHRSLITNIFDSWAAIKAAKLAGPSAPGSKQVPDGAPNCLLGLSFVFTGELSSFSREEAV
DLAKRFGGRVVLQPSSKTDFVVLGDDAGPAKLAAIKKHGLKTLSEDEFLNLIATREGADE
GGLDAKTKKKLEKEQQEIRKAAKEMEKRENSSSHVQLDPSIQLWTTRYAPQSLKEICGNK
GQVEKLLQWLNDWPSSLKSGFKKPGKIGMNIFRGVLITGPPGIGKTTSAHLCAKLAGFTP
IELNASDTRSKKLVENGMNINNTSLDGFIHGAGSTNSVGVPITGKTCLIMDEVDGMSAGD
RGGVGALNAIIKKSKIPIICIANDRGAQKLKPLMSTTFSLNFSRWDSNTHRKLVLTNAPD
QGMKVPANVVDQLIQGSQSDIRQVLNMLSTWKLSSDSMDFDESKSLVKMNEKYAIMTPFD
ITSKILGPYLFSSTARETLGDKMELYFQDHSFVPLFIQENYLKSQPARVRNLDGPEKELK
HLQLMEQASASISDGDLVDSLIHGPEQHWGLMPLHAVCSTVRPASCLYGSGVHFGGPNSM
SFPQWLGQNSKKNKLARQLADVQVRMRLKVSSDKAEIRQSYVPALFPYIVRPLVDEGAGA
VDKVIERMDAYYLSKEDWETIVELGVGENKDVKIASAAKSSFTRKYNGSDHPIPFHKAQD
LGKMPKKLTGGPAPDLEEAFIDDIPDDEEEDVKPKESIDDISGDKLIQAPKKRKAVGTTK
AKTKTKTKTSKKS
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaaaacaaacaaaagtgggaaggggggaggcaaagatatccggacattcttc
ggtggtagtcaaaaatcgagcggtagtggcagcgcggcgtacttgacaggctgtagatct
tcaaagccaattaataccgatagtgatgacgagcccattggaccttccaagttgacgggt
cgcatggttttagatggcagtgaagacgagaaccctcgaccaccgcagaaacgtaaagca
cccctccgcgtggatgacgatgaaagcagggaagattcccctcctagaaagaaggcctcc
atctcgtccaccaaagcaaacgtcaggaaatccgtcaagcctcggaaagacgaagattat
gaaatcgaaaaatcctcttctgaagaagatttcattgacgacgaaccggacgacatcaag
acaaaagtcaagcgaaaatcgtcttcatctaagaaagagaaggctacgaaatcggaacct
gaaaacaagaaggtagcaccaacaaaggctgctgcaaaacccaagtctgccaatcttcac
ctccaccgttcactcataactaatatctttgatagttgggctgcaatcaaagcagcaaaa
ctcgcggggccatctgctccgggatcgaaacaagtccctgatggcgcgcctaattgtttg
ttgggactttctttcgtgtttaccggagaactcagcagcttttctcgagaagaggcggtt
gatttagcgaagcggttcggagggcgcgtcgttctccagccatcgagtaagaccgatttt
gttgtcttgggagacgatgccggccccgccaaattagcagcaatcaagaaacatggtcta
aagactctcagcgaagacgaattcttaaacctgattgcaactagggagggtgcggatgaa
ggtggtctcgacgcgaaaacgaagaaaaagttggagaaagagcagcaagaaatccgtaaa
gctgcgaaagaaatggagaaacgcgaaaattcttcctctcacgtccagctcgacccttcc
attcaactctggactacacgctacgcaccccagtcacttaaagagatttgtggaaacaag
ggccaggttgaaaagctcctccaatggctgaacgattggcccagtagtctgaaatcgggc
tttaagaagcccggtaagattgggatgaacatattccgaggcgttctaatcactggacca
cctggcattggtaagactaccagtgcccatctgtgtgctaaactagctgggtttactccc
atcgagctcaacgccagtgatacacggagcaagaaactcgtcgaaaacgggatgaacata
aacaatacgtcgttagatggttttatccatggcgcagggtccacgaattctgttggtgtg
cctatcactggtaaaacttgtcttatcatggacgaggtcgatggtatgtcggctggcgat
cgcggtggtgtaggagcgcttaatgcgatcatcaagaagagcaagattccgattatatgt
atcgctaatgatcgtggagcacaaaagctcaagcctctcatgtcgaccacattcagtctg
aacttctcaaggtgggatagtaatacccatcgcaaactagtactgacaaacgcaccagac
caggggatgaaagttccagcgaacgttgtagatcaacttattcagggctcgcaatccgac
attcggcaggtgttaaatatgctttcaacatggaagttgtccagcgatagtatggatttt
gatgaaagtaaatcactcgtcaagatgaacgaaaaatatgcaatcatgactccttttgat
atcacctcgaaaattcttggaccatacctcttctcttccacagctagggagactcttggc
gacaagatggaactgtatttccaggatcactctttcgttccgctttttattcaggagaat
tatctgaaaagtcaacccgcgagagtacggaatctggacgggcctgagaaggagttaaag
catcttcaactcatggagcaggcatcggcgtcaatctctgatggtgatcttgttgatagc
cttatacatgggcctgaacagcattggggtcttatgcctctgcacgctgtatgttcaact
gttcgaccggcgtcatgtttgtatggttctggagtccacttcggtggtcctaattcgatg
tcattcccccagtggcttggtcagaattccaaaaaaaacaagctcgcgcgtcaactggct
gacgtgcaagtacgtatgaggttgaaagtatccagtgacaaggccgaaattcgacagtca
tacgttccagcattgtttccttatattgtgagacctttggtggatgagggcgcgggcgct
gtggacaaagtgattgaacgtatggatgcgtactacctgtcaaaagaggattgggaaaca
atagtagagctgggagtgggtgagaataaagacgtcaaaatagcgagtgcggcgaagagc
tcgttcactaggaagtataatggttctgatcatcctattccattccacaaggcgcaggat
ctcgggaaaatgccgaagaaacttacgggaggtcctgctcccgaccttgaggaggcattt
atcgatgacattccggatgatgaagaggaagacgtcaaaccaaaggagtcgattgatgat
atatccggtgataagctcattcaagcacctaaaaagaggaaggcagtgggtacgacaaag
gcgaagacaaagacaaagacaaagacctcgaagaaatcgtga
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