Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT119267
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Entry
AGABI1DRAFT119267 CDS
T03136
Symbol
AGABI1DRAFT_119267
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03022
Basal transcription factors
abp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AGABI1DRAFT119267 (AGABI1DRAFT_119267)
09124 Replication and repair
03420 Nucleotide excision repair
AGABI1DRAFT119267 (AGABI1DRAFT_119267)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abp03021
]
AGABI1DRAFT119267 (AGABI1DRAFT_119267)
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT119267 (AGABI1DRAFT_119267)
Transcription machinery [BR:
abp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AGABI1DRAFT119267 (AGABI1DRAFT_119267)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AGABI1DRAFT119267 (AGABI1DRAFT_119267)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
18825545
NCBI-ProteinID:
XP_007328314
JGI:
Agabi_varbur_1_119267
UniProt:
K5W1M5
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MPTIVCTAKVSCKKLPGLLELTDSHLQWTQEGHKAPSILLPRADLSSLFCSKEGAPQVRL
KIALFTDENGHNFTFVSPSARNERDKFKKELTQIVGTNKAIADAGARKPLIPAPTPIAAV
SSTPTKLSTPTVSNASTPKASGGVPIIPASRAASVASERRASTPVIAGVDPVNDFKLRRK
VLMGDPDLAALHKDLVIGGQITEAEFWDGREHLLLAQSATDSQRKGKPGQLVDPRPETVD
GGEIKIRITPQLVYDIFDEYPVVAKAYSENVPSQLTEEQFWKRYFQSKLFNVHRASIRSS
ATQHVVKDDDVFDKYLERDDDEMEPRRQRADPVEALIDLAATLEDHGETGNEKDITMQAG
RQRGALPLIRKFNEHSERLLNSALGEVPPAKRRRLDPGEDRYAPIELDDLNDSEASAGIL
LEMKDRQRYFEGRTAGQAEDPEAKNSEDYDAILHELQTNLQSWGVNLTQLKIERKAGDSA
LIGMTHNVAALLDVRSRKNDIPDGFFRQLTTCQTAANEFLRQFWSATYPLPVDSQSILSI
ATPAQRAAKAAKMIGYLAKTSEKVDALVRLAQQHGVDGSRVETAMRPLLNAVNHALKFHQ
NKKLQPPPARR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccatagtgtgtacggcaaaagtatcctgcaaaaaactccctggcttgcttgag
ctcacagacagccacctacaatggactcaggaagggcataaggccccttcaatactcctc
ccccgggctgatttgtcttcgttgttctgcagcaaagagggcgcaccacaagtcaggcta
aaaattgcgctcttcacggatgaaaatggccacaatttcacgttcgtctcgcccagtgct
cggaatgaacgcgacaagttcaaaaaagagttgacacaaatcgtcggaaccaacaaggcc
attgctgatgctggagctcgaaaacccctaatacctgcacctacgcctattgctgctgta
tcctctacgcccactaagctctctacgccgaccgtttcgaatgcttcaacacctaaagcc
tctggtggcgttcctattattcctgcatctcgcgccgcgtctgtcgcgagtgaacgacga
gcatctaccccagtcatcgccggtgttgaccctgtcaacgatttcaagcttcggagaaaa
gttctaatgggcgatcctgacctcgcagcgcttcacaaggatcttgtcatcggtggtcaa
atcacggaagcagagttctgggacggaagagagcacttgttgctcgctcaatccgcgacg
gacagccaacggaagggtaagccaggtcaattagttgacccgcgaccagagacagtcgac
ggcggagaaatcaagattcgtattaccccgcagctcgtttatgacatctttgacgagtac
cccgtggtggctaaagcgtatagcgagaatgtccccagtcaacttaccgaagagcaattc
tggaaacgatatttccagtccaagttgttcaacgtacatcgtgcatctatacggtcttcg
gcaactcaacatgttgtcaaagacgatgacgtcttcgataaatatctagagagagatgat
gatgagatggaacctcgacggcagagagcagatcctgttgaagcgctaattgacttggcc
gctactctggaggatcatggagagactggcaacgagaaagatattaccatgcaagccgga
cgacaaaggggcgcacttcctctgatacgcaagtttaatgagcattcagaacggcttcta
aattctgctttgggtgaagtacctcccgccaaacgacggcggcttgatccaggagaggat
cgttatgcgccgattgaattggatgatcttaatgattcagaggcatccgctggcatcctg
ctagaaatgaaagaccggcaacgttattttgaaggtcggacagctggccaagcagaggat
ccagaggctaaaaatagcgaggattacgatgccattctacatgaactacaaaccaatctc
caaagctggggtgtcaacttaacacaacttaagatcgaacgtaaggctggagacagtgcg
ttgataggaatgacgcacaatgttgcggcactactcgatgtcaggtcacgaaaaaacgat
attcccgatggcttcttcagacagttgacaacatgtcaaacggcagccaatgagttcctc
cgacaattttggtcggcgacatatcctctgcccgtggattcacaatcaattctttcaatt
gctactcctgcgcaacgagctgccaaggcggctaaaatgatcggttacctcgcgaaaacc
tctgaaaaagtcgacgctttggtgcgtttagcccagcaacatggcgtcgatggatctcgt
gttgaaacagccatgagacctctgctcaacgcagtaaatcatgctttaaaattccaccag
aataagaagctccagcctcccccggcccgaagataa
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integrated database retrieval system
