Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT119574
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Entry
AGABI1DRAFT119574 CDS
T03136
Symbol
AGABI1DRAFT_119574
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03013
Nucleocytoplasmic transport
abp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AGABI1DRAFT119574 (AGABI1DRAFT_119574)
03015 mRNA surveillance pathway
AGABI1DRAFT119574 (AGABI1DRAFT_119574)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT119574 (AGABI1DRAFT_119574)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
AGABI1DRAFT119574 (AGABI1DRAFT_119574)
mRNA cycle factors
P-body specific factors
AGABI1DRAFT119574 (AGABI1DRAFT_119574)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Pes-10
Motif
Other DBs
NCBI-GeneID:
18825569
NCBI-ProteinID:
XP_007328563
JGI:
Agabi_varbur_1_119574
UniProt:
K5XD15
LinkDB
All DBs
Position
Unknown
AA seq
1076 aa
AA seq
DB search
MRKELSRLDSSLKRHTTLIKRIRQSMAAENRDQIIKDIESLSLEKYIDEIAGAIVEGIAR
CKTERDVWGAVEIISLLHRRFSKEFTSVLISLLSTAIGAPSRASLSGLTAEQKEKEDGAR
VLRQRPVLRICSELALVGVIRDGPEKSGGEWIMKAIKELLSNDPSLSSLPLLITFLKSYS
RPFLGIVPPATLKQNPVAAEPGSLSAAQSTASDDALHFPPIRNEEEELVELDIRDRFKRM
CEGYYDNVCKKLVMEHKRLQEQDKRNHEAYIRSGEIFEDRQQAYEKMTKGYEKLLANCQS
LSELLYLPLPNLPRASHKSESIQIGSTHGSMFNDSEDTTVVGGKWEDEEERRFYEDVPDL
KDYVPSSVLGIDNSNEVADDSGKDKEQQRIQQEKEDFRLLEEELQKLQTKASPPLSPHLT
PQGPSQLLTALLVRLQDATNRALIDQAAIDFAFLNSKAARKRLVKALSQVPKNRVDLLPH
YSRLVATLNKYMPDVGSDLLSLLEDEFRYLQRKKNVVKELGELRMRNITFFSHLTKFRVV
PPHVILHVFKVCLDDFTGTNIDNIAMLLEGCGRFLLRSEETTERFGTMLELMRRKQSLQH
FDQRQILLLENAYYQCNPPERAPKQEKHRSSIELFIRHLVYDVLAKRTIDKVLKLIRKLD
WDNEEVKLVLHKVFTKPWKIKYSSISLLAMLTYDLQRYRPAFSISVVDQILEDIRRGLEQ
NVYSANQKRIATIKFLGELYNYRMFSSSIIFDTLWLIVTFGHPDGRPLPGQPVALDMPDD
FFRVRLVCALLDTCGMCFDRGTQKKKLDNFLTFFQFYVLCKQPLPMDVDFMLSDSLEAVR
PKFAMAKDLEEAAIAVDEMYNLAYQVAGHTDESGEESDHDDEKRSNDDDGEDEAMDEDEE
GHESPVGERAPSPDEEIVLSTSNNNQEYFGPSEEADTEFAKELAKLVTDTSGESRKVDKR
TALALWDSAVLPPALRKKKTVDDGEEDEVVKDVEGSRTMNFTIVTKRGNKQLARQLAIPT
TSPLAIHTRSAQMQDKVEQQQLKRLVLDYEQREEAEEWKALEARNRAGAIKIRYNG
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaagagctttcgaggctcgattcatctctcaagcgtcatacgactctgatcaag
cgcattcgtcaatctatggctgccgaaaacagagatcagattattaaggatatcgagtct
ctctcactcgagaaatacattgacgaaatagccggtgcaatcgttgagggtattgctcgt
tgtaaaaccgagagggatgtatggggagctgttgaaatcatctccctcttacaccgtcgc
ttttcgaaagaattcacttctgtactaatatctctattatccaccgctattggcgcgcct
tcgagggcaagtctcagtggcctgactgcagagcaaaaggaaaaagaggatggtgcacgc
gtactgcggcaacgcccagtccttcgcatatgctcagaattggcattagtcggtgtcata
cgcgacggcccagaaaaaagtggtggggaatggattatgaaggcgattaaggagttgctt
tcaaacgacccaagtctatcctcattacctcttctcatcacctttcttaaatcatattct
cgaccttttcttggtatcgtgccgccagccaccctcaaacaaaatcctgttgccgctgaa
cctggatccctttcggctgctcaatctactgctagcgacgatgccttacactttccaccc
atcagaaacgaggaagaggaacttgtcgaactagacattcgtgaccgcttcaaacgaatg
tgcgagggttactatgataatgtctgtaagaagctggtcatggagcacaagcgcctacaa
gaacaagacaagcgaaaccatgaagcatatattcgttctggggagatttttgaagaccgt
caacaagcttatgaaaagatgaccaaaggatatgaaaagcttctcgctaattgccaatcg
ctatcggagcttttataccttccccttcccaatctgcctagggcatcgcataaatccgaa
tcgatacagataggctctacgcatgggtccatgttcaatgattcggaagatactaccgta
gtaggagggaagtgggaggacgaagaagaacgcaggttctatgaggatgtcccggattta
aaggattacgtcccaagcagtgtgctgggaatcgacaattcgaatgaagtcgcagatgat
agtggcaaagataaggaacaacaacgcatacaacaggaaaaagaggatttccgtctgctc
gaggaagaattacaaaagcttcaaaccaaagcttcgcctccactctcgcctcatcttaca
ccacaaggaccatctcaactcttgaccgccttgctcgttcgacttcaagacgcgactaat
cgtgcacttatagatcaagcggccatcgattttgcttttctcaactcaaaggctgcgcgc
aagcgtctcgtcaaggctctgagccaagtcccgaaaaatcgagtcgatcttcttccacat
tattccagattagtcgcgactctcaataaatacatgccggacgttggttcggatctctta
tcccttctagaggatgaatttcgctatcttcaaagaaagaaaaatgtagtaaaggagctt
ggagagctcagaatgagaaatataacctttttctctcaccttactaaatttcgggtcgtc
ccacctcatgttatccttcatgtcttcaaagtttgtctggatgatttcaccggtacaaac
atagataacatcgccatgttacttgagggatgtggccgcttcttgttgaggagtgaagag
acaacggaacggttcggcacaatgcttgaattaatgcggcgtaagcaaagtctacagcac
ttcgaccaacgccaaatccttctattggagaatgcctactatcaatgcaaccccccggaa
cgtgctcccaagcaagaaaagcatcgcagttccatagaattatttatacgccatcttgtt
tatgatgttcttgccaaaagaacgatagacaaggtcctcaagctgatccggaagctggac
tgggataacgaagaagtcaagttggttctacacaaagtttttaccaagccttggaaaatc
aaatacagtagcatctccctgctagcgatgttgacttatgacttgcagcgttatcgtcca
gccttctccatctccgtcgtcgaccagatcttggaagacataaggcggggtctcgagcaa
aatgtctacagcgccaatcaaaaaagaatagccacaatcaagtttttgggagagctctat
aattatcgcatgttcagctccagcatcatttttgatactctgtggttgattgttacattt
gggcatccggatggacgaccgttacctggccaaccagttgcattggacatgccggatgat
ttcttccgcgtcagacttgtatgcgcgcttctggatacttgtggaatgtgcttcgatcgt
ggaacgcagaagaagaaattggataacttcctgaccttcttccagttctatgttctttgc
aaacaacctcttcccatggatgtcgacttcatgctgtccgactccctagaggcggtgcgg
cctaaattcgcaatggccaaggatctcgaagaagcagccattgccgtggatgagatgtat
aacttagcttatcaagtcgcaggacatacggatgaaagtggagaggaaagtgaccatgac
gacgagaagcgttcaaatgatgatgatggtgaagatgaagccatggacgaggatgaggaa
ggccacgaatcaccagttggtgaacgtgccccatctcctgacgaggaaatcgttttgtca
acgagcaataacaatcaggagtacttcgggccttctgaggaggccgatacagagtttgca
aaagagttggctaaacttgtcactgatacttcaggggaatcgagaaaggtcgacaagcga
acggccctggcactctgggattccgccgttcttcctccagcgcttcggaaaaagaaaacg
gttgatgatggcgaagaggacgaggttgtcaaagatgtggaaggcagtaggacgatgaac
tttactattgttacgaagcgcggaaacaagcagctggcccgtcagctcgctataccgacc
acctctcctctggctatacacacacgcagcgctcaaatgcaggacaaggttgaacagcaa
caattgaagcggcttgtgctcgactatgaacagcgcgaagaagccgaggaatggaaagcc
cttgaagcccgtaacagggccggtgcgatcaaaatacggtacaatggatga
DBGET
integrated database retrieval system
