Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT121430
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Entry
AGABI1DRAFT121430 CDS
T03136
Symbol
AGABI1DRAFT_121430
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AGABI1DRAFT121430 (AGABI1DRAFT_121430)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT121430 (AGABI1DRAFT_121430)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AGABI1DRAFT121430 (AGABI1DRAFT_121430)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
Nup54_C
COMPASS-Shg1
MnmE_helical
Motif
Other DBs
NCBI-GeneID:
18825778
NCBI-ProteinID:
XP_007330993
JGI:
Agabi_varbur_1_121430
UniProt:
K5WSC4
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MCLVDLIRTTNNNRLCSGGINRVEYLNQNQNQQQQQQQPSLFGSTTTGQPSTGLFGGSST
NAGGGLFGNRSQQPGTGSLFGSTTGTGAALNASTLPSSSLLGSRTALTPAQQQADAQTQA
LQLQQRIEAIYHAWNPSSPQCRFQHYFYNLVSPERVGLYGRPTNALNDTLWEKARRENPD
PTCHVPVLAIGFDDLRTRVEAQNKKSTEHQQYLNELKTRLESLATQHTLSNSSRLLKAVL
AQTQLTQRLLKFVQHLHLLIPSVRSSSIRPEEEQLRSSLEELEEELRRGRMKGKLNELWA
HLGAVNASKERARVGVGEWAVVDEDGLAHLTQILADQQAGLSHLTKILQKVLKDVSIIMG
TSSNTAQSDYEVDNLLSSTTDILRASALR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttggtggatctaatacgaacaaccaacaacaatcgtctttgttcggggggaata
aaccgggtggaatatttgaaccagaaccagaatcaacagcagcagcagcaacagcctagc
ctcttcggtagtacgactacaggacaaccttccacgggtctgtttgggggttcttctacc
aacgctggtggtggccttttcggcaatagatctcaacagcctggtactggttcgctcttc
ggaagcacgactggaacgggggcagcattgaacgcgtctacgctaccctcaagcagttta
ttaggctcaagaaccgctctgacgccagctcagcagcaagccgatgctcaaactcaggcg
ctccaacttcaacaaaggatagaggccatatatcatgcatggaacccgtcctcgcctcaa
tgtcgattccaacattacttttataacctcgtcagtccagaacgcgtcggtttgtacggt
cgacccacaaacgctctcaacgataccctttgggaaaaagccagacgcgagaatcctgat
ccaacctgtcacgttcctgttctagcaataggattcgacgacctccgcacccgagtcgaa
gcccaaaacaaaaaatcaactgaacatcaacaatatctcaacgaactcaaaacccgtctc
gaatctctcgccactcaacatacactatccaattcctctcgactcttgaaagctgtattg
gcgcaaacgcaattgacgcaaaggttattgaagtttgtacaacatttgcatttattgata
ccgagtgtgaggagttcgtcgattagacctgaggaagagcagttgaggagttcgttggag
gaacttgaggaggaattgaggaggggtaggatgaaagggaagttgaatgaattgtgggct
catcttggtgctgtcaatgcgtcaaaggagcgtgcgagggttggagtgggagaatgggcg
gttgtggatgaggatggtttggcacacttgactcagattctagcagatcaacaagcaggt
ttatcacacctaaccaagatcctgcaaaaagtattaaaagacgttagtatcatcatgggc
accagttcaaacaccgcacaatccgattacgaagtagataatcttctcagctccaccaca
gatatacttcgtgcgagcgcgttgcgatga
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integrated database retrieval system
