Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT122321
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Entry
AGABI1DRAFT122321 CDS
T03136
Symbol
AGABI1DRAFT_122321
Name
(RefSeq) hypothetical protein
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03420
Nucleotide excision repair
abp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AGABI1DRAFT122321 (AGABI1DRAFT_122321)
03460 Fanconi anemia pathway
AGABI1DRAFT122321 (AGABI1DRAFT_122321)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abp03032
]
AGABI1DRAFT122321 (AGABI1DRAFT_122321)
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT122321 (AGABI1DRAFT_122321)
DNA replication proteins [BR:
abp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
AGABI1DRAFT122321 (AGABI1DRAFT_122321)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
AGABI1DRAFT122321 (AGABI1DRAFT_122321)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
18825885
NCBI-ProteinID:
XP_007332381
JGI:
Agabi_varbur_1_122321
UniProt:
K5WP66
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MSTLLPFHKSILEEIHDPATSDLLILARGLGLRRIICTLMKIYDSNKNLILLVNATQEEE
SAIGEELGIMGCRRPGLRVIGYETSSKDRQNLYKQGGLMSVTSRILVVDMLQNDIPVHLI
TGMLILHAERVTPTVIEAFIVRLFREKNRDGFVKAFTDQPEHITSGMSPLKNVMKELQLR
RAHLYPRFHEHINKTLERRRADVVELSQPLSQSMSEIHHAIIQCISTTLAELKRSNKELE
LDDFNVENTYFRSFEGIVRSRLSPVWHKVGPKTKQLINDLNVLRQLLFYLLSYDALSFHA
YLETIIESNTISTRTGGPKVHQSPWLLTDAANIIFEVAKRRCFIISSIPKETAVTHQPME
VDDQDAWDLLDELEQPGTNNQGKRKLHERPAWLPKNIQPVLEEQPKWDLLSEILLEIESE
IIHLSSNKNTSQRGTDTVLIMTSSTRSCDLIQDFLDTMDPDAESGWKGRVMMRRRLKGYL
GWRGRLNPNDNNNFAPTNQAGSAGMTSRKGKEREDNLSEALKKKDREKMEKSASRRRTRG
GAPSTGGGRSATSDKASPEVIDVDKPDDMTLWSKDDPDLAATLMNASNDFALDLLTQDEF
ESSYGLLPPEQTIVIRACSDDTDDRMLAEIQPRFIVMFEPSVEFIRRVEVYRSSYPGMAV
RVYHMVYADSCEEHRYLAAIRKEKESFERLVKERGSMLLTLEERRKPGGGGEGENVIRTI
STRLAGGRRELTTEPPKIIVDMREFRSALPSLLHAAQLLVVPATLTVGDYILTPDICVER
KSLSDLVSSFNSGRLYTQCEFMSVHYKHPVLLIEFEEDKSFSLETISELKNYAKPTQKYP
NKPSRPSTFNSLSSEPPSSVTTIQSKLVLLTLSFPRLRTIWSQSPYATAEIFKDLKSNQP
EPDPIKAITIGADGDDPNDVGKGFNTVAEELVRALPGIGSGGLASSSGIVNTVMRRCKNV
RELCELKEDEVKELVGVGPGKVLYEFLHKGE
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctcctccccttccacaagtctattctcgaggaaatccatgaccctgcaacg
agcgaccttctcattctcgcccgaggccttggactccggcgtatcatatgcacgcttatg
aagatctatgactccaataaaaaccttattttgttagtcaatgccacgcaagaggaagaa
tctgctatcggcgaagagctagggatcatggggtgtcgaaggccaggactgcgcgttatt
ggatatgaaacttcgagtaaagacagacagaacctttacaaacagggagggctcatgtcc
gtaacatcgcgaatccttgttgttgatatgttgcaaaacgacattcccgtgcatctcatc
acaggcatgctcatacttcatgcagagagggttacaccgacggtcatcgaagccttcatc
gtccgcctctttcgcgagaagaacagagacgggttcgtcaaagcgttcacagatcagcca
gagcatataaccagtggcatgtcgcccctcaagaacgtgatgaaggagttgcaactgcgg
agagcgcacttgtatcctcgatttcacgagcacattaacaagacgcttgagcgacgacgc
gccgacgtggttgaattatctcaaccgctctcgcaatccatgtcagaaattcatcatgcc
ataatccaatgcatttcgaccactcttgcagaactcaaacggtctaataaagaactggag
ttagatgatttcaatgtcgagaatacgtattttcgttcatttgaaggcattgtgcgatca
cgattgtctccggtatggcataaagtcggtccgaaaacgaaacaactcatcaatgacttg
aacgtcctacgtcaactcctcttttatttgttatcatatgatgccctttcatttcacgcc
tatctggagaccataattgaatcaaatactatctctacaagaacgggcgggcccaaagta
catcaatcaccatggcttttaactgatgctgccaacatcatattcgaagttgccaagcga
cgttgtttcatcatttcctcaattccgaaggagactgcagtaacgcaccagcctatggaa
gtagacgatcaagacgcatgggatctccttgacgaacttgaacagcctggaacgaacaat
caaggaaagagaaaactacacgagcgcccggcatggctacccaaaaatattcagcccgta
ctcgaagaacaaccgaaatgggatttactatcggagattcttcttgaaatcgagtcggaa
atcatacatctttccagtaacaagaatacaagtcaacgaggaacagacactgtacttatc
atgacatcgtctacgaggagttgcgatttgatacaagattttttggatacgatggatccg
gatgcggagagtggttggaagggaagggtgatgatgaggcgaagattgaaaggatatctt
gggtggagaggaagacttaatcccaatgataacaataattttgccccgacgaatcaggct
gggagtgcggggatgacgagtcggaaaggaaaagaaagggaggataacttgagcgaagca
ttgaagaagaaggacagagagaagatggaaaagtctgcgagtagacgaaggacgagaggc
ggagcaccttcaacaggcggtggaaggagtgctacgagtgataaggcgagcccggaggtg
attgacgtggataagcctgatgatatgacactgtggtcgaaggatgatccggatttggct
gcgacgctcatgaacgccagtaacgatttcgcacttgatcttctcacacaggatgaattt
gaatcctcgtatggattattacctcctgaacaaacgatcgtgattcgagcgtgttcggat
gatacagacgatcgtatgttggctgaaattcaacctcgattcatcgttatgttcgaacct
tcagtcgagttcattcgacgagtcgaggtttatcgcagctcgtatccgggcatggcagta
cgagtgtatcacatggtatacgccgactcatgtgaagaacaccggtatttggcggcgatt
agaaaagagaaggagtcatttgagaggttggttaaagagcgtggatctatgttgctgaca
cttgaagagcgacgaaaacctggtggaggtggagaaggggagaatgtaatcagaacgatt
agtacgagacttgcgggtgggaggagggaattgactactgagcctcccaagatcatcgtg
gacatgcgggaatttcgatcagcattgccttcgctcttgcacgcagcgcaattacttgtc
gtcccagcgactttgactgtgggagattatatcctcacgccagatatttgtgtcgagcgg
aagagtttatcggatttggtgtcgagttttaacagcggacgattatacacccaatgtgaa
ttcatgtccgtccattacaaacatcccgtacttttaatcgaattcgaagaagacaaatca
ttttccctcgaaacgatttccgagctcaaaaattacgccaagccgactcaaaaatacccc
aacaaaccgagtagaccatcaaccttcaattctttatccagtgaacccccatcctcagtt
acaactatccaatctaaactcgttctgctcacactctcgttcccgagattacgaaccatc
tggtcacaatccccatacgccacagcagaaatattcaaagacctcaaaagtaatcaacca
gagccggatcctatcaaagctattactattggcgctgatggggatgatcctaatgacgtt
gggaaagggtttaatactgttgcagaggagttggtgagggctttgccgggtattggtagt
ggaggtttggctagttcgagtgggatcgtgaatactgtgatgaggaggtgtaagaatgtg
agagaactttgtgagttgaaggaggatgaggtgaaggaattggtcggtgttggacctggg
aaggtgctttatgagtttctgcataagggagagtga
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