Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT125544
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Entry
AGABI1DRAFT125544 CDS
T03136
Symbol
AGABI1DRAFT_125544
Name
(RefSeq) hypothetical protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
abp03036
]
AGABI1DRAFT125544 (AGABI1DRAFT_125544)
Chromosome and associated proteins [BR:
abp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
AGABI1DRAFT125544 (AGABI1DRAFT_125544)
microRNA pathway
RISC loading complex
AGABI1DRAFT125544 (AGABI1DRAFT_125544)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
DEAD
ResIII
Helicase_C
Dicer_dimer
ScsC_N
Motif
Other DBs
NCBI-GeneID:
18826326
NCBI-ProteinID:
XP_007326912
JGI:
Agabi_varbur_1_125544
UniProt:
K5Y4V0
LinkDB
All DBs
Position
Unknown
AA seq
1430 aa
AA seq
DB search
MTIIDPIANTTSELRPRKYQEEIFERAQKENVITALNTGSGKTLIGLLLIKWMSALESSG
DKLIIFLVPRVALVEQQAKYLRDNTPLRTEKLYGALDISLSDRMQWKKKLGKCDVIVMTP
QILVNFITHSIWSLRQIALLVFDECHHARKNHPYNIIMQEYFYIKEVEDRPKIFGMTASP
VWNTKDPVGSLLTLETNLDSVIISVREHVDELAVHTPRPSELITIFPAPPDNYDFHDPNV
LRCLSIISPATWEHLEVAWPSLVMRHDATLYNLGPYCASLFLYLEVRHVLKSVQTGLRTI
EDTKMEVVEYVAGASAPKRNPPEELNLIRDILLDFEGFFWRNDCPNRVPIPVPLKWCSPK
VDALKHILLEFYTPNFQVIVFVEQRQVAACLSKILPVIPGLEGKIRSAHLVGQGVNSDGV
SKATDTYHGDAIQAFRKGEVNVLIATSVAEEGLDFPACDLVVRFDPFRHMVGYVQSRGRA
RNADSRFIVMIRQDDQVSFEFYQNLLAQEPEMNKAYQGRQRAAVTMPAQQEDEDEEDDLN
PLDLASRERYVVPSTEAVLSYDSAIGLLNYLCALIPCDAYTPPHKPKFTGDFQSTVQLPL
SIPLPPDQLTYTGPLKCSKKEAKRAVSFLAVKRLHELDIFDQYLLPTPGSTLGEEEMAHT
WFGLESRDTPTVMNVDVKYPWTIGEKLWLHPIYLGGEPVTGLVSGTPLPLVELRSDILVR
LGHPQAFVLDNEEEVELRRTMHEYTRLGIYYRVTGSPLAEPLGVYLVPLTDTLEVDFRQI
RRVVDNPRGIASLDDIIYGDEKKLLVLNRFESGRTRVLQKIRSDLSPMSIPPIGSVEATY
KGIDASGVEKIVTSSSYHEYWTNRGSRRRKIQLEIPKDGPLLEAPRLDKHASSRYSLDPS
YRIPTIEPDFKVPPIVPMNTCGWVDMSPDVIRAFEILPTLCHKITDAYRAQSTRLNIGLP
FIPDDLLMEALTLPNVDADFSNQRLETLGDAVLDICTTVHLMFKYPRRHEGQLSTLRAGR
VSNKFLVSCARTVELERFISSEKMGVEKWPFVEQKGYEAKEIRDRKSVKRQIPRRGLQDC
VEALLGASFLAGGIPMALRTGVCFGLSFGGIQPWGERCRRAEAREIGVPALVAGLEKEIG
YVFENPELLVEAVTHPSLEFSSTPSYQRLEFLGDSVIKMLVTEYLFHKFPKATSHQLALP
RTKAICSPALAHIAIRKIHIHKYLLQNSIDLNNAINLYVPVLESATADEIVRRGWRYDPP
KAISDAFESVVGAVFVDVGYDLDRTGGIVCRLMEDILEVLNPSIPKDPVSEVLEWLASVG
CSKGHNLKFKRSTEERNGQAVESVSAVFHGQIVAGPIVSNSKAVSRFTAAERAFMALRAS
DEELFKKLCDCQNQMITDEVTGSGEVDDLEILDEVEESEVANMLMVEDSV
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcattgacccaatcgccaataccacatccgaacttcgaccacgcaaataccag
gaggaaatctttgaacgggcacagaaagagaatgtgattactgccctcaacacaggttct
ggcaagacgctcatcgggctgttactcattaaatggatgtctgcacttgagagctctggg
gacaagttgatcatctttctggtcccacgagtcgctctggtggagcaacaagcaaagtac
ctgcgtgataacacacccctgcgcaccgaaaaattatacggagcacttgatatctcgctg
agtgataggatgcagtggaagaaaaaattaggaaaatgcgacgtgatcgtcatgactcca
caaatactcgttaatttcattacccattctatttggagcctcagacagatcgcgcttttg
gtctttgacgaatgtcatcatgctcgtaaaaaccatccctacaacattataatgcaagaa
tatttttacatcaaggaggttgaagacagaccaaaaatctttgggatgactgcctccccc
gtttggaatacgaaagatcctgttggctccctcttaactctggaaacgaatcttgattca
gttatcatcagtgtccgtgaacacgtcgatgagttggccgtccatacacctagaccctct
gagctgattactattttccctgctcctccggataattatgactttcacgatcccaatgtc
ttgcgttgcctttctattatctcgccagcgacatgggaacatctcgaggtggcgtggcca
agcctcgtgatgcgacacgatgcgaccctatacaacttaggaccatactgcgcgtccctt
tttctgtaccttgaagttcgacatgtccttaagagcgtgcaaacgggactccgcaccatc
gaagataccaaaatggaggttgtggaatatgtggctggcgcaagtgcacccaaacgtaac
ccgccggaagagctgaacctcatacgagacattctcttggactttgaaggcttcttttgg
aggaacgactgccccaatagggttcctattccagtgccactcaaatggtgttccccgaag
gtcgatgccctcaagcatattctcctcgaattctatacgccgaactttcaagtcatcgtc
tttgtagagcagcgtcaagttgctgcatgtttgtccaaaattcttccagtcataccgggg
ttagagggaaagatccgctcagctcatcttgttggccaaggtgtcaatagcgatggtgtg
tcgaaggcaacagacacttatcatggcgacgcaatacaggcatttcggaaaggagaggtg
aacgtccttatcgcaacatctgttgccgaagaaggtctggactttccagcttgcgacctt
gtagtgcgtttcgacccattccggcatatggtgggatatgttcaatcccgaggacgagcc
cgaaacgccgattctcgattcattgtcatgatacgtcaggatgatcaagttagcttcgag
ttctatcaaaatctgctggctcaagagcctgagatgaacaaagcctaccagggtcgacag
cgtgcagcagtaacaatgcctgcgcaacaagaggatgaggacgaggaagacgaccttaat
cctttggatcttgcatctcgagaacgatatgtcgttccttcgactgaggcggttctctcg
tatgatagcgccatcggtttgctgaactacctatgcgctctcataccctgcgacgcctat
acacctccacacaaaccaaagttcaccggagattttcaatccaccgtccaacttcctctc
agtatcccattaccccccgaccaactaacatataccggtcccttgaaatgctcaaagaaa
gaagcaaaaagagctgtctcgtttttggctgttaaacggttacatgaacttgacattttc
gatcaatatttactcccgacgccaggtagcaccttgggggaagaggagatggctcataca
tggtttgggttggaatcacgagatacaccgacagtgatgaatgttgatgtgaaatatcca
tggacaataggagagaaactttggttacaccccatctaccttggaggggagcctgtcaca
ggattggtttcagggacgccgttaccattggttgaacttcgatcggatattttggtccga
cttggtcatcctcaagcctttgttttggataacgaggaagaggtggaactcaggaggacg
atgcatgaatacacgagactgggcatttattatcgcgtcactggatcccctctagcagaa
ccattgggtgtatacctcgttcctctcaccgataccttggaggtcgatttccgtcaaata
cggcgagtggtggataaccccagaggaattgctagtttggacgacatcatctacggtgac
gaaaaaaagcttctggtactcaacagattcgaaagcggtcggacaagagttttacagaag
attagaagcgatctttccccgatgagcattccgccaatagggtctgtcgaggctacctac
aagggcatcgatgcttctggcgtagaaaagattgtgaccagttcatcctatcacgaatat
tggacgaatagagggtctcgaaggcgaaagattcaactcgaaatacccaaggacggacct
cttctggaagcaccacgattagacaaacacgctagttctcgatattcactagacccatca
tatcgtatcccaaccatcgaacccgatttcaaagtccccccaatcgttccgatgaacact
tgtggttgggttgacatgtcacccgacgttatcagggcatttgaaattcttccaacacta
tgccataaaatcactgatgcctatcgtgctcagagtacacgtctgaatatcgggcttcca
tttattccagatgatcttttgatggaagctcttactcttccaaatgttgatgcggatttt
agtaatcaacggttagagacgcttggtgatgccgtcttggatatctgtacgactgtgcat
ttaatgttcaaatacccgagacgacacgaaggacaactgtcaactcttcgagctgggcgt
gtatcgaacaagtttttggtatcatgtgctcgaacggttgaactggaaaggttcatatca
tcggaaaaaatgggcgttgagaaatggccttttgtagagcagaaagggtatgaagcaaaa
gaaatcagggatagaaagtcggttaaaaggcaaatcccgcgtcgaggtttacaggactgt
gtcgaggcattacttggtgcgagtttccttgctggtggaattcccatggctttgagaact
ggggtatgttttgggttgtcgtttggtgggatacaaccttggggtgaaagatgtaggaga
gctgaagcgagagaaattggtgtaccggctttggttgcgggtttggagaaggagattgga
tatgtttttgagaacccggaattactcgtcgaagctgttacgcatccatcgcttgagttt
tcctcgacaccttcatatcaacgactcgaatttttaggagactctgttattaaaatgctc
gtcacagaatatctcttccacaaatttcctaaagcaacatctcatcaactcgctcttcct
cgtaccaaagcaatctgctcacccgccctagcccatatcgccatccgcaaaattcatatt
cacaaatacctactacaaaacagtatcgacttgaacaatgctatcaatctctacgtccct
gttctcgaatcggctactgctgatgagattgtacgtagaggatggcgatatgatcctcca
aaagctataagtgatgcttttgagagtgttgttggtgcggtgtttgtggatgtaggatat
gatttggataggacgggaggtattgtttgtaggttgatggaagacattttagaggttttg
aatccttccattccgaaagatccggtatcggaagtattggaatggcttgcgagtgtcggt
tgttcaaaaggccataacttgaaattcaagagaagtactgaagagaggaatggtcaagct
gtggaatctgttagtgcggtgtttcatggtcagattgttgcaggaccgattgtgagtaat
agtaaagcggtgtcgaggtttacggcggcggagagagcgtttatggctctgagagcttcg
gatgaggagttgtttaagaaactttgtgattgtcaaaatcagatgataacggatgaggtg
accgggagtggggaagttgatgatttggaaattctggatgaggtagaagagtcggaagtg
gctaatatgttgatggtagaagatagtgtttga
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integrated database retrieval system
