Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT126234
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Entry
AGABI1DRAFT126234 CDS
T03136
Symbol
AGABI1DRAFT_126234
Name
(RefSeq) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGABI1DRAFT126234 (AGABI1DRAFT_126234)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT126234 (AGABI1DRAFT_126234)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AGABI1DRAFT126234 (AGABI1DRAFT_126234)
mRNA degradation factors
5'-3' decay
Decapping complex
AGABI1DRAFT126234 (AGABI1DRAFT_126234)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
18826450
NCBI-ProteinID:
XP_007327671
JGI:
Agabi_varbur_1_126234
UniProt:
K5XER2
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MSFFDLPNSDLDKAAEDVAVYTWGDESYDGLGDALQERGDELNDETFGSVEQVGKDFDFS
QPALPDDHRRLTESSARPRQSPFQELAPPAGDHQRGVDPPHERSARATPQSLEAIWDNKS
PFSVLPKSNGAGRSPLSALSSSRAPLSSSAVARPQSTGLGAEPAKIPTLQEVEEEMRLAA
QQTRLQGTSSRQQLHQQQQLIQEMRLRQQQQQQQQQEERYLLELARQARQQDPRQFYDDL
RVTEHDQRLLEQEQRRILLEQQQQEQRRLLLEQEQRRMLVEERERQLELERQQQLYQLQQ
QEQQRLQLQRLMQQQQLQQQRTPPPRMHPVSQSPRFLEHQRQLLQLQQQEQLQVEELQRQ
LANNLSLQQQEGRRRVAGPADYELQAAQLLQQQQQQRRQRSQSPGFNQFNGNNQEIGPQN
IQLQQRLLSEMAHAEFLREMQTATPKQLEQQEALREEAMRKILEAEKMEEKRRKKAAKIA
HMSRYNDLMTQSDKDFITRIQVSQLVTQDPYADDFYAQVYGAILRSRMGLQSDERVLKFG
SGGGVGLGLAPQKGYRRPSAMQRMEQQVERIVSNARKREEEKGLHSVHSLQGALGRTSGR
SYKAAPRQLLQVETSGNSPVMSQAHAHVSKGSVSISKEGGAAEAARLGRAALGDAADTDN
LVRREPLSNREILTIVENLYDLILGVEQVKRDQPLPEEEQERHDEWKNDYDELMDNVWHE
LRVLVPLDTSDPHPFISILGPSKGKKILPRLTRHLSSQRMLTLLTLLVACFGQLDVVRDA
HFLDSLEETPELADVERQTNAFLASVMQSILPIVAKSNLRLITGLLGLLLDRSDIATVAR
TKVSDVASWLSKAIDQVTFAAQPGLALLTLFLSRVEVIKQSIASGTQDVADIPTPEEAQQ
WSNMFNHLFDLLAPNMLVLFPSSRIMFPNQGQQHPTVPYDNADQHVWQFLAAFALHGSLE
QHQVLVASLREKILENLLAVSRGWFTTEEERDTKLGNVNLFLNALNLDSSQIAL
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcttcgatctccccaattctgacctagacaaggctgcagaagacgtcgccgtc
tacacctggggcgacgagtcctacgatggcctgggtgatgccctccaggagcggggagat
gagctcaacgacgagacctttggcagcgtcgaacaagtcggcaaagactttgatttctcc
caacctgccctacccgatgaccaccgcaggctcacagaatcctccgcaagaccccgtcag
tcgcctttccaggagctggctccacctgcgggagaccaccaacgcggggttgacccccca
cacgaacgctccgctcgcgctaccccacaatcgttagaggctatctgggacaacaagtct
ccgttttctgtccttccaaaatcaaatggcgcgggacgctccccactgtccgccctctct
tcgtccagggccccgctatcctcctccgctgtcgctcgcccacagtcgacgggactcggt
gccgaacctgcaaaaatcccaaccctgcaagaagttgaagaagagatgcgtctcgccgct
cagcaaacccggcttcaaggaacgtcgtccaggcagcaactgcatcaacagcagcaactt
attcaagagatgcgcctgcgccagcagcagcagcaacagcaacagcaggaggaacgttac
ctcttggagctcgctcgtcaagcccgccaacaggatcctcgtcagttctatgatgatctt
cgcgtgacagaacacgatcagcgactcctcgaacaggagcaacgtaggatactgctcgaa
cagcagcaacaggaacagcgtcgtctgctacttgaacaagagcagcgtcgaatgcttgta
gaagaacgcgagcgtcaactcgaactggaacgccagcagcaattgtaccagttgcagcag
caagagcagcagcgcctccaacttcagcgtctcatgcagcaacaacaactgcaacaacaa
cggactcctcctcccagaatgcatcctgtctcccagtcaccacggttcttggagcaccag
cgtcaactccttcaattgcaacaacaagaacagttacaagtagaggaacttcagcgccaa
ctggcaaacaacctttctttgcagcaacaagaagggagaagacgcgtagccggaccagct
gattacgagcttcaagcggctcaactgcttcaacagcaacagcaacaaagaaggcaacgg
tctcaatcaccaggcttcaatcagttcaacggcaacaaccaggagattggtcctcaaaac
attcagctccaacagcgtcttctctccgaaatggcgcatgcagagtttttgcgtgagatg
cagaccgccactcctaaacaattagagcagcaggaagccttacgggaggaagctatgcga
aaaatacttgaagctgagaaaatggaagaaaagagacgtaaaaaggcagcaaaaattgca
catatgtctcgttataatgatctcatgacacaatcggacaaagattttatcactcgtatt
caagtttcacagctcgttacccaggatccatacgcggatgatttctatgctcaagtctat
ggtgccatcttgcgttcaaggatgggacttcaatccgacgaacgagtactcaagtttggc
tcgggcggaggagtcggtcttggactggcccctcaaaaaggttaccgccgacctagtgct
atgcagcgtatggaacagcaggtggagaggatcgtgagcaatgcaagaaaaagggaggag
gaaaaaggattacattctgtccacagccttcaaggcgcacttggaagaacttcaggccgt
agctacaaggctgctccgcgtcagttgttgcaagtcgaaacatctggaaattctcccgtc
atgtctcaagcccacgcgcacgtttcaaaaggctcagtatccatttccaaggaaggtggt
gctgcagaagccgctagactgggtcgtgctgccttgggtgatgccgcagataccgacaat
ctggtgcggagggagccactgagcaaccgcgagatcttgacgattgtggagaacttgtat
gatctcatcctcggtgtggagcaagtcaagagagatcagcctctgccggaagaagagcag
gaaagacacgacgaatggaaaaacgattatgatgaattgatggataatgtatggcatgaa
cttcgcgtactcgtcccgctcgacacaagcgacccgcatcctttcatttctattcttggt
ccgagcaaaggaaaaaagattttgcctcgtctcactcggcatctcagctcgcagaggatg
ttgactttgctgactctgcttgttgcttgtttcgggcaactcgatgtcgttagggatgct
cattttttagattcactcgaagaaacgccagaacttgccgatgttgagcgtcagactaat
gcattccttgcgagcgtcatgcaaagcatcctcccgatcgtagctaaatcaaacttgcgt
ttgatcactggtttgttgggactgttgttggatcgcagtgatatcgcaactgtcgcgcga
acaaaggtgagcgacgttgcatcatggttatcgaaagcgattgatcaagttacttttgct
gcgcagccgggattagctttattgaccttgttcctgagtcgtgtcgaagtgatcaaacaa
agtattgctagtgggactcaggatgtcgctgatattccgacacctgaagaagcgcagcag
tggagtaatatgttcaaccatctctttgatctcctcgctcccaatatgctcgtcctcttt
ccttcttctcgaatcatgttcccaaatcagggacagcaacatccaacagtaccctatgat
aacgcggatcaacatgtctggcaatttcttgccgcatttgcacttcatggaagtctagaa
caacaccaagttcttgtcgcttcgcttcgcgaaaaaatattagaaaatctcctggctgtc
agtcggggttggtttacgacagaggaagaacgagacacaaagttgggtaatgtcaacttg
ttcttgaatgctctcaatttagatagctcgcaaattgctctctga
DBGET
integrated database retrieval system
