Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT127944
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Entry
AGABI1DRAFT127944 CDS
T03136
Symbol
AGABI1DRAFT_127944
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGABI1DRAFT127944 (AGABI1DRAFT_127944)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT127944 (AGABI1DRAFT_127944)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AGABI1DRAFT127944 (AGABI1DRAFT_127944)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AGABI1DRAFT127944 (AGABI1DRAFT_127944)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
18826738
NCBI-ProteinID:
XP_007329459
JGI:
Agabi_varbur_1_127944
UniProt:
K5XY58
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MAARKLQTEIDRTLKKVSEGVELFESIYEKMQASTNQTQKEKLELDLKTQIKKLQRLRDQ
IKTWVASNDIKDKSQLLDNRRLIETQMEKFKACEKEMKTKAFSKEGLIQATKLDPKEQEK
EEATQWLQSQVEELQMQIESAEAEVESLQGTGKKRNKQGSNAGRLEALETLNERRKWHIS
RLELVLRLLNNGSLTTDRVLGLKEDVQYFVESNTEEDFEEDEGIYDELNLEEEEEKFGLV
ADEDESSSSDSGSEDKTTRPAKKHEEESVSSGKRDDSPILKKAAVTLQLRKHSLDTKPAA
NLNFSQSMSSVVKAPVPKPPQLPPIKYATVAQAMTQSSQQSHVPTASSSTTHLPATSQTQ
TSPSAAVTSPLVPPPSSMQDHSSISASSPSLTHPSVISPILSSAASVSHQPDGSTYSAQD
SPVSSDAVPAKTQSPPSPQKVAAVPKYHIDVASSTDQPQQQVSNDSQPALSQTAPGLSPL
PQQVQQIPSTTRAKSPPQSVTPGQPIFPPGVKVAQGEQQQQPAIGYQRPLSSAPQQQTRS
SASSAFPGSLQDLVVSFENVKQKASVRMNNLDQVHKMLEGGYTSMPQPQDTEKQVYFTAP
YYPQTPHPLLNTAAIFSQLDVETLFYVFYYLPGTYQQHLAAKELKRQSWRFHVKYLTWFQ
RHSEPQAITDEYEQGVYVYFDWEGSWCQRKKSDFRFEYRYLED
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagaaaactgcagaccgaaatcgaccgaaccctgaagaaggtatccgaaggc
gtcgagctcttcgagagtatatacgagaagatgcaggcatcgactaaccagacccagaaa
gagaagctcgaactcgacctcaagactcagattaagaagcttcagcggctgcgagaccaa
atcaagacttgggtagccagcaacgacatcaaggacaagtcccagctactcgataaccga
aggctcatcgagacgcaaatggagaaattcaaggcctgcgaaaaggagatgaaaacaaag
gccttttccaaagagggcctcatacaggccaccaaactcgaccctaaagaacaagagaaa
gaagaggccactcaatggttgcagtctcaggtcgaagaactccagatgcagatcgaatcc
gccgaagcagaagtcgagtctctacagggcactggcaaaaagcgcaacaagcaaggctca
aatgccggacgccttgaagcccttgaaactctgaatgaacgtcgcaaatggcacatcagc
cgactcgaacttgtcctccgccttctcaacaatggctctttaaccactgacagggtcttg
ggtctcaaagaagatgtccagtattttgtagaaagcaatactgaagaagactttgaagaa
gacgaaggcatatatgacgagcttaatctcgaagaggaagaagagaaattcgggcttgtc
gcggatgaggacgaaagcagtagctctgacagcgggagcgaagacaaaacaacccggccc
gccaagaagcacgaagaagagtctgtatccagtggcaaacgagacgacagtcctattctc
aaaaaagcggctgtcacgctacagctacgaaagcattctctggatacgaaacctgcagcg
aatctcaatttctcccaatccatgtctagtgtcgtaaaagctccagttccgaaaccacca
caactacctccaattaagtacgcgaccgttgcgcaagctatgacacaaagctcccaacag
tcgcatgtgccgacggcgtcatcgtcaaccacccacctaccggcaacatcgcaaacccaa
acttcaccctcggctgcagtcacctcaccattagtaccacctccttcatctatgcaggat
cattcctctatctccgcttcctcgccaagcctaacgcatccatcggtgataagtccaatc
ttgtcttctgccgcctcagtatctcaccaacccgacggctcaacgtattccgcacaagat
tcaccagtttcatcagatgctgttcctgcgaagactcagtcacccccatcaccccagaaa
gtcgcagctgtgcccaagtaccatatagatgtagcctcgagtacagaccagccgcaacag
caagtcagcaatgactcccaacctgctctatctcagactgccccgggtctctcgccactt
ccccaacaagtacaacagattccttccactacaagagcgaaatcacctcctcagagtgtc
accccaggtcaacccatttttcctcctggagtgaaggttgcacagggcgaacagcagcag
caacccgccattgggtatcaacgacctctgtcgtctgcaccacaacagcagacccgctct
tcggcttcttcggcattccctgggtcattgcaagatcttgtggtatcatttgagaatgtc
aagcagaaagcctcagtccgcatgaacaatctcgatcaagtacacaagatgctcgagggt
ggttatactagtatgcctcagccacaagatacggaaaagcaagtttattttacagcgcca
tattatcctcaaactccccatcctttattgaacactgcagctatcttttcccaactagat
gtggagacactgttctacgtcttctattaccttccgggaacataccaacaacatctagca
gcaaaagagttgaagcgtcagtcatggcgattccacgtcaagtatctgacatggtttcag
cggcattctgaaccacaggctattaccgacgagtatgaacaaggggtatatgtctacttt
gactgggaaggatcatggtgtcaacggaagaagagcgatttccgctttgaataccgctat
ctggaagactaa
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