Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT128037
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Entry
AGABI1DRAFT128037 CDS
T03136
Symbol
AGABI1DRAFT_128037
Name
(RefSeq) hypothetical protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
abp03036
]
AGABI1DRAFT128037 (AGABI1DRAFT_128037)
Chromosome and associated proteins [BR:
abp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
AGABI1DRAFT128037 (AGABI1DRAFT_128037)
microRNA pathway
RISC loading complex
AGABI1DRAFT128037 (AGABI1DRAFT_128037)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
Motif
Other DBs
NCBI-GeneID:
18826746
NCBI-ProteinID:
XP_007329531
JGI:
Agabi_varbur_1_128037
UniProt:
K5W0P1
LinkDB
All DBs
Position
Unknown
AA seq
1365 aa
AA seq
DB search
MSSSHSGMTSHISAQYKRKRPIDSLDPEDVEPPVKMLRTDPGPEGGLQEEGMSLAEHVTP
LVDVEELKTHAKHRNIIASCLPQYTGQVINDIACWSFEESNICGSMIAIVANDNAHLETY
VGAQRLLPTTQVSTAADLGHELAHSSLNGKIERYLLLSSPEEFLRLSLHEIQTITKNCAL
ILYNTTIPGMKNHQVFLQKIVDICSCLEPPAVKPRFLVLLQSMHLDDIQDPDIRRLKSTF
NAKLLRVAEFECGPLVFGDLPTELEVAYTSTHVQETSLCQRVREFNTTLSLDRHFRNANL
VLYQLGPCAADLVWSNAFASPDWADDGLHIREDTAEAQVRELVKHWSFELPNLDPTSRNM
NVSHKFILLVQQLEAHQILGDNFRGIIFVQKRIVAQLLVALIHISMPRLQFLRPISLTNY
RVLSDSEAFERMTQQFVSGEYNLLIATKSFEDAGLPKAPVVILFDVFESQISRAYTRRCA
SVQGGYLIHMLEQGNSLHHYALSHSALDPEMIRWATTLENDYFNRAPPQPPQESNDPYSS
DSEDDRDLEVIQDPITGHHIRKNQSTIAFHRYAARADAQTKCEDLFKFVSQKSTYSEWRC
RINLAGTPVDGVSGPAAPTKALARKEACYIACLRLQHFGLLDSAFFFRTRARKVESHDET
FDCPGPHSGSIHERPHIPLTPEFWKNSILTSPSLRFLYPIVVSIPFPVSSVCEKAPICIL
TRAALPPIPQFQLSHDGDALTLQSQRYLPLSLDAGRLDLIHKFTIRFCRIIMNKPFEALS
YKNLGYMFAPLRKAWKPPDDEEYDLSEDIDWEMVSVVSENWAVPFGDLTQLRKEAEDALI
QDRAVEFTNRYEILCIREDMTPTSEVEGKGGKTLLEQCYSRRKNFEGLAHPNQPILEVMR
MPAPTNYLNPPISQLELPAKTTQYLIPECCRRLTVSASTLRMGYLLPSIIRRIDEFLLIK
QLNAKNLNHCVKDDLLIMATSSPLAGNDYNYERLELLGDALLKYLSTTYVFVQNLNGTEG
ELHTARQRFISNRQLCDIVSGWGLPGYIQLKPFNIKSWLPPGMIIDDRQKESTVGGGVMD
DGHLNMRPAQPNEDRIGASKRPKNKKRRLNKKTSSPIANKTVADVAEAIIGAAYISGGRD
SALKATKALMIPFTDVEEWADFGRKASAPRLDTGHAPEPSVMHFIETITGFRFQQPSLLR
LTLTQNSMEMKDHQRLEFLGDAVLDFLVVRYLYDKDEHASPGELSVMKSLMVSNSILAAI
CVWSGLHRFVHVRQQQKQVVWDYEKALRGREAAETSSTSKEAARVTYFWMDLDVPKVLSD
VIESIIGAAYISDDFSQAGVEVIFDKMLLPFYQKFVFTKPEAASS
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagtcactccggaatgacttcacatatcagcgcgcaatataaacgaaagaga
cctatcgactccttggaccctgaagacgtcgagccaccagttaagatgcttagaacagac
cctggtccagaaggcggtttacaagaagaaggcatgagtttggcagaacatgttacccct
ttggtcgacgtggaagaactcaagacacacgcgaaacacaggaatatcattgcatcttgt
ctgccccagtatactggtcaggttatcaacgacattgcttgctggtcttttgaagagtca
aatatctgtggttcaatgattgctattgttgcaaatgataacgctcatttagaaacatat
gttggagcacagaggctccttccaaccacccaagtttccacggctgctgatctaggacat
gaattagcccactcgagtttgaatggcaaaatcgaaagatatctcttgctgtcttcccct
gaggaattcttacgattgtcgttacatgaaatacaaacgatcaccaagaattgtgcgctc
atcctgtacaataccactatcccgggaatgaaaaaccaccaagtatttctgcagaagatc
gtagatatctgttcttgtctcgagccacctgcggtgaaacctcgtttcctggtgctactt
caaagcatgcatttggacgatatccaggatcctgatattcgtcggcttaagtccaccttc
aatgccaagctgcttcgtgttgccgaatttgaatgtggaccattggttttcggggactta
cccactgagctcgaggtagcctacacgtcaactcatgtacaggaaacatccttgtgtcag
cgagtgagggagtttaacacaacattatctcttgaccgtcactttcgcaatgctaatttg
gttttgtatcaactcgggccatgcgctgctgacctcgtctggagtaacgcatttgcctcc
cctgattgggctgacgatggtcttcacattcgcgaggatacggctgaagctcaagttcgt
gaacttgtcaagcactggtccttcgaattaccgaaccttgatccgacttcccggaacatg
aacgtcagccacaaattcatcctccttgttcagcaattggaagcgcatcaaatccttgga
gacaacttccgcggcatcatatttgtgcaaaaacggattgtcgctcagctattggtcgct
ctgattcatatctcaatgccgcgactgcaattcctacgtcctatatccttgacaaattac
cgcgtcttgtcagattctgaggccttcgaacgaatgacccagcaatttgtctcaggagag
tataatcttttgattgcgacaaaatcgtttgaggatgctggcctccccaaagctcccgtc
gttatcttatttgatgtattcgagagccaaatatcacgcgcatacacacgtcgttgcgct
tcagtccaaggggggtatctaattcatatgctagagcaaggtaatagcctccatcattat
gcactatcccatagcgcattagatccggaaatgattcgatgggccaccaccttagagaac
gactatttcaaccgtgccccgccacagccgccacaagaaagtaacgacccgtatagctcg
gatagtgaagatgatcgagaccttgaggttatccaggatccaattaccggacatcacata
cggaaaaatcaatccacaatagccttccatcgttatgctgcacgagcagacgcgcaaaca
aagtgcgaagacctctttaagtttgtctcacaaaaaagcacctacagcgaatggcgttgt
aggatcaatcttgcgggcactccagttgatggagtatcgggtccggcagctcctacgaaa
gctctggcccggaaggaggcatgttacattgcgtgtctgcgcctgcaacattttggactt
ctggattcggcattcttctttcgcactcgcgccagaaaagtcgagtcgcatgacgagacc
ttcgactgtccgggcccccactctggatccatacacgaaaggccacatatacctctcact
cctgagttttggaagaactccatcttaacgtcaccttccctccgattcctttatccaata
gttgtctctatacccttccccgtatcaagtgtctgcgaaaaggcgcccatttgtatcctt
actagagcggccttacctccaatcccgcagttccagctttctcacgatggcgatgcattg
acattacaatctcagagatacttgcccttatctctggacgctggacggctagatttgatc
cacaagttcaccatcagattttgccgtattatcatgaacaaaccatttgaagcattgtcg
tataagaatttgggatatatgtttgcaccccttagaaaagcctggaaacctcctgatgat
gaagaatacgatctttcagaagacattgactgggaaatggtttccgtggtatcggaaaac
tgggctgttccctttggcgacttgacgcagttgagaaaggaggcagaagacgccttaata
caagatagggctgtggaatttaccaacaggtatgagatcctgtgtatcagagaagatatg
actccaacgagtgaagttgaaggtaaaggcggaaagacgttgttagagcaatgctatagt
cgtcgaaagaatttcgaaggactcgctcatccgaatcaacctattctagaggtgatgcgc
atgcctgcacccaccaattatctcaaccctcctatatctcaacttgagcttcctgcgaag
accacgcaatatttgatccctgaatgttgccgcaggctgaccgtttcggcgagcactttg
cgtatgggatatttactgccttctatcatacgcaggatcgatgaatttctcctaatcaag
cagctcaacgcaaaaaatttgaaccactgcgttaaagatgatttgttgataatggccacc
tcctctccgttagccggaaacgattacaattatgagcgactggaactcctcggagatgcc
ttactcaagtatctctccaccacatacgtatttgtccaaaacctgaatggtaccgaaggc
gaacttcatacggccaggcagagattcataagcaaccgacaactgtgcgacattgtcagc
ggttggggcctacctggctacattcagctgaaaccattcaacatcaagtcctggcttcct
cctggaatgatcatagacgacagacaaaaagagtcgacagtgggcggaggagtaatggat
gacggtcatctcaatatgaggcccgcacagccaaacgaagaccgcataggtgcaagcaaa
cgacccaagaataagaagagacgtctgaacaagaagacctcatcgccgatcgccaacaag
acggtcgccgatgttgcagaggcgatcataggtgcagcatacatttcaggtggacgcgac
tcagctttgaaggctaccaaggcgttgatgataccattcacggacgtagaagaatgggct
gatttcggacgtaaggcatctgctcctcgactcgatacaggtcatgcacctgaaccttct
gtgatgcatttcatcgagacaatcaccggatttaggtttcaacaaccctccctattgcgt
ctgacactgactcagaacagcatggaaatgaaggaccaccaacgactcgagttcctcgga
gacgccgtcctggactttttggtcgttcgatatctgtatgataaagatgagcatgcatcg
ccgggcgagcttagcgtaatgaagagcttaatggtgtcgaattccattcttgcggcaatt
tgcgtctggtctggactacatagatttgtccacgttaggcagcagcaaaagcaggtcgtc
tgggattacgagaaagcactccgtggcagagaagcggcagaaacttcctctaccagcaaa
gaggcagcaagagtcacgtatttttggatggaccttgacgtgccaaaagtgctttcggac
gttattgagtcaattattggagccgcgtatatctcggatgacttctcccaggcgggtgtc
gaagtcatctttgacaaaatgttgctgccattttaccaaaaatttgtttttacaaagccg
gaggcagcttcatcataa
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integrated database retrieval system
