Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT129365
Help
Entry
AGABI1DRAFT129365 CDS
T03136
Symbol
AGABI1DRAFT_129365
Name
(RefSeq) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
AGABI1DRAFT129365 (AGABI1DRAFT_129365)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abp03021
]
AGABI1DRAFT129365 (AGABI1DRAFT_129365)
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT129365 (AGABI1DRAFT_129365)
Transcription machinery [BR:
abp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
AGABI1DRAFT129365 (AGABI1DRAFT_129365)
RNA polymerase I system
AGABI1DRAFT129365 (AGABI1DRAFT_129365)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
AGABI1DRAFT129365 (AGABI1DRAFT_129365)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
KOW5_SPT5
KOW2_Spt5
Spt5-NGN
KOW1_SPT5
Motif
Other DBs
NCBI-GeneID:
18826998
NCBI-ProteinID:
XP_007330943
JGI:
Agabi_varbur_1_129365
UniProt:
K5X5M6
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MNIKKKAMDPDVDQGPSRFIKPIPAGDAVNAGGIIKEEALELVLKCDYDLDEDIARPAVK
PVDETQNVHIEMVNSYVEKRKVGKRPKSDICVFLDLEPSVEGGSDESDDGTEDSFIDDED
EDEIHARPGMQLLADTMENKTEPFQRRLSKYVGRTGTQTLPTGTSPLHSEWPTWEVPVTV
GLEAVAVFRILQKCEAGFCVDHNAPRSAFFNPCLPGRIFVEVLRYDDAKFVCTGIPGVRT
NRITAVEHGAARDYLDRSSFSFSQTIMAGCWVRLTRSYYKHDLALVVDKDTRANTVDVVV
VPRVSYSKDPLGKRKRGGRPEQALFDPEKCQEIFGQKSIEVITAHAGIPGHDADEVVGYI
FCSQRYDRRGYLLLKDLPHGHYKPVDEASRVEYMLFSNCGAVSTSVLSSSIKTLANRSLK
RSEKVQILDGTFQGHIGTVEDVHPHYVEINLPVTVFHGLLELPLLSVCRTFVVGDRVLVN
SGDRRGTQGFVTSMDVRLQSVTIQSIMPQVFEIETSVDNVQIMPHDQACVIPNPKPARLP
NWRDANLQRYVNAQVVMKSHSFKGYTGVIRSINGDAIADIELHIFSVGGIQMTQRHILDL
YFILEEDKRLYETQNEETYDLTVTNIVVQPHKPPTPPPRSQTPEPVFNPLECDPAWTPQE
GEGEREPAPPTVLPFIPNVNTTSQNPTSSSLLPFLKKLSNLQSFKDCYILVGPIVSADWT
RFQKAVRGVESYHVIKDSGKEPLVSAGVFAQIVSKLNGEPFFPNLTTLHIVNLENFLKHY
PFLLSQQLRTVSADLPYTWVNAKSVAAFLQALVSLAPEVTFLSIVYAKPLAFTYIGAINN
LTCLRTLEINRLANLQETADIFASLKALDKLEELKLTIEDSAPTWCPAQNARFSPALGST
NPLTIETYLESLQSLCIKGPSQIISEFLDFLRTPDLVSLSITSTCWLHVSAQPGHELLDA
NERRTQMSYQSSSPRPARVQSQACMAACTIAHLHSWTVTRWSKSLENLTIRSCDRTTFDL
SGISKHEALRNLDIKGGTTPIGSLLSSGIPVFNPLRTLGLSSSASNLTLFELDEIASRSP
SLLKLSSSFYIGSESELDSLAEVEPLSHPLKELTMERAILKDVGSHTFLLASKIARRLHL
LFPNLARLDYPPGESRFWEDVWQILQLFQKIALDEKRRHKLATGVSETCVMTDDDRSSRN
SGLEYVTAVSADCKLRE
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaagaaaaaggctatggatcctgacgtggatcaaggaccaagtagattcata
aaaccaatacctgcgggagatgctgtcaacgcgggtgggataattaaagaagaagcattg
gagttggtactcaaatgtgattatgacctggacgaggacatagccaggccagcggtgaag
cccgtggacgagacacaaaatgtccacatagaaatggtgaattcatatgttgagaaaaga
aaggtcgggaagagacccaagtcagacatatgtgtgtttttggatttggaaccatcagtg
gaaggtggcagtgatgaaagtgatgatggaacagaagacagctttattgatgacgaggac
gaggacgagatacatgctcgtccgggcatgcagctcctagccgatactatggagaacaaa
acagaacctttccaacgacgtctgtcaaagtatgtgggaagaaccggcacgcaaacactt
cctacaggaacgtctccgttgcattctgaatggccaacatgggaggtaccagtcactgtc
ggccttgaagccgttgcagtcttccgcatcctccaaaaatgcgaagcaggtttctgcgta
gaccacaatgcacctcgttctgcattttttaacccctgtttgcctggccgtattttcgtc
gaggtgttgcgatatgacgatgcgaaatttgtatgcactgggatacccggagttcgtact
aaccgtatcacggcggtagaacatggggctgcaagggattatctggatcgttcctcattt
tcattttcacaaacgataatggcgggatgttgggtacggttgactcgatcatactataaa
catgatctggctctcgtcgtagataaagacactcgggccaacacggtggacgttgtggta
gtaccgcgagtgtcctatagcaaagacccacttggcaaacgcaaacgtgggggtcgcccg
gagcaggctctatttgacccagagaagtgccaagaaatattcggtcaaaaatcaatcgaa
gtgattactgcacacgctggtataccaggccatgatgcggacgaggttgtaggctacatc
ttctgcagtcagaggtacgacaggagaggttatctcttactcaaagacttgccacatggt
cactacaagcctgttgacgaagcatcccgagtagaatacatgctattctccaactgtggc
gcggtttccacatcggtactttcttcgtcaatcaagacacttgcaaataggtctctgaaa
cgctcagagaaagttcaaattttggatggtacatttcaagggcacattgggacggtagag
gatgttcatccacattatgtggaaattaatcttccagttacggtattccatggcttgctg
gagctacctttgttgtcagtttgtcgcacatttgtagtgggtgatcgcgtactcgtgaat
tcgggtgacagaagaggcacccaaggttttgttacatcaatggatgttcgcttacaatca
gttacaatacagtcgataatgccacaggtatttgaaattgagacctctgtggataatgta
caaatcatgcctcatgatcaggcgtgtgttatacctaatccgaagcctgcgcggctacca
aactggcgagacgccaatctgcaacggtatgtgaatgcgcaggtcgtcatgaagagtcat
tctttcaaaggatacaccggtgtgatacggtctatcaacggcgacgcaattgcagacatt
gagctgcatatattcagtgtaggaggtattcaaatgactcaacggcatattcttgatcta
tatttcatactcgaggaagacaagagattatacgaaactcaaaatgaggaaacatatgat
ttaaccgtaacaaatattgtcgtgcagccccacaagccaccgacgccgccacctcgatcg
caaacaccggagccggtgttcaacccactggaatgtgatcctgcgtggactcctcaagaa
ggtgaaggtgaaagagaaccagcaccacccacagtacttccttttattccaaatgttaac
actacaagtcaaaatccgacctcatcgtcgctcctgcctttcctgaagaagctctcaaat
ttgcaatcgttcaaagattgttatattctggtcggtccaatcgtatccgctgattggact
cgatttcaaaaggctgtaagaggagtagaatcttaccacgttatcaaagattctgggaaa
gagcctttggtatctgccggcgtgttcgctcaaatcgtctcaaagctcaatggtgaacca
ttttttcccaatctcacgacccttcacattgtcaacttggagaatttcctcaaacactac
cctttcctcctctctcaacaacttcgaactgtgtcagccgaccttccatatacatgggtt
aacgcgaagagtgtagctgcttttctacaagcactcgtatccttggcacctgaggtaaca
ttcctcagtattgtctatgcaaagcctttggcgttcacctacattggcgccataaataat
cttacctgtctccggactttggagatcaatcgcttggctaatctgcaggagactgcagac
atcttcgcgtctcttaaagctctcgataagctcgaggaattgaaactcactatcgaggat
tctgcgccaacctggtgccctgctcaaaacgcacgtttttctccggcactgggaagcaca
aacccgcttactatcgagacatatttggaatcgcttcagtctctttgtattaagggcccc
tcacaaatcatatctgaattcctcgattttctgagaacgccagatctggtttccctttcc
atcacatcgacgtgctggcttcatgtgtcagcgcagccgggccatgagctactcgatgcg
aatgaaaggcgaacccagatgtcatatcaatcatccagtccgcggccggctagggttcag
agccaggcctgtatggccgcgtgcaccattgcgcacctccacagctggacagttactcga
tggtcaaagtctcttgagaatttgactattcgctcttgtgatcggactacttttgacctc
tcaggtatttcgaagcatgaagcgctgaggaatcttgacatcaaaggtggcacaaccccc
attggatctttgctctcgtctggcatccccgtcttcaatccgctgcggacacttggcctt
tcatcctctgcttcaaacctgacattgttcgagctcgatgaaatcgcatctcgctccccg
agtttattgaaattatcctcgtcgttctatatcggcagcgaatcggaactcgattcgctt
gctgaagtagaacctctgtctcacccattgaaagagcttacgatggaaagagcaatcctc
aaagatgtagggagtcacacatttctccttgcatcgaagatcgctcgacgcctccatctc
ttgtttccgaacctcgcacgattggactacccacccggcgagagtagattttgggaggat
gtatggcagatcttgcaactctttcaaaagattgctttagacgagaaacggcgtcacaag
cttgcgacaggcgttagcgaaacgtgcgtcatgactgacgatgatcgcagttctcgaaac
tcaggtcttgaatacgttactgcagtttcggcagattgtaaactccgagaataa
DBGET
integrated database retrieval system
