Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT129613
Help
Entry
AGABI1DRAFT129613 CDS
T03136
Symbol
AGABI1DRAFT_129613
Name
(RefSeq) hypothetical protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp04138
Autophagy - yeast
abp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
AGABI1DRAFT129613 (AGABI1DRAFT_129613)
04148 Efferocytosis
AGABI1DRAFT129613 (AGABI1DRAFT_129613)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
abp04131
]
AGABI1DRAFT129613 (AGABI1DRAFT_129613)
Membrane trafficking [BR:
abp04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
AGABI1DRAFT129613 (AGABI1DRAFT_129613)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
TPR_Vps41
RPN7
Motif
Other DBs
NCBI-GeneID:
18827044
NCBI-ProteinID:
XP_007331142
JGI:
Agabi_varbur_1_129613
UniProt:
K5XTX8
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MVPFFAPKRLVASLGEKAESLCQHGDRLYVGTSNGNLLIYEVTNVPGEDGGTSIKLMDTK
KGLVRRAIDQLGFVREINSLIVLSEMTVTLFPVPGFTPSTVLVKAKAAFSFGLHTTIQHS
PASTSVGTGKDVSNIATPPSATIGLPGSMADSFSHPNAGATTMSIPSVVTQLLVGCRRKV
VVYTWKDGEAQEIKEALIPHSPRAIAFLDADTAGFAYAPDYAIFSIPTMSIVDVTLPLPT
ATSATMGMGAFSGLTGYMSLGLGAKAKPTIAPVGNGEVLIGKDSEGIFVGKDGRPSGEKN
IAWVASPDEIAYIRPYVFSVFPAGTIPSEILDASTTSESASIVPSSSSNGVQQPPSMIRT
SVVQIRSSISAHVLQNFTIPFPVPSSPSPVGSVTADNKSSTDTVATTSTSTSLPSTAVQN
ASIHIPLFSSSTKSPLYMITTPVDRTVAAAEGSSIWQFGMRPWAEQIDELVENGYYADAL
SLLDVIDESALLDKVQRRTRIRALNAVSQFRASKFKEALDTFLELDINPAKVIALYPEAV
SRRLSVPQKEWVSLYGGPAPSPDSASTSPLPGGGSGDPPGEDGTGGETVGGKHEKSSSEP
AGTTITNSLGGSGVGTGAIRRLKGAGLGFLGAHGYKEKGDSDTASIHSVRRGVVKDDFRR
SIEALTGYLVDRRTKLDPVLTSVNITFQNQHDDHKPLSEVPIDELFALPDAPLSVLTPEE
LLRFAQVVDTALYKSYIIIRPGLLKSFCSLPNWCEVSEVEEDLRGIQRFAELKDLYYGKK
MHAKALQLLKDLSEEVSDIEDKLRPSITYLQKLGPEYLDHIFQFSRWIFDQNVDMGFEIF
LSEDVELPHQAVANYLESIDSKICAKYLEYIIEERHEETPAYHDRLAELYISMTLNAKRR
NEDTTRKEVYAKLLQFLNTNDKIGADRLYGILSPTDLYEARAILLGRLGRHDQALELYVY
HLHDYYKAEEYCKQIYQPKSPTSNVFLTLLRIYLRPTIKPTPTDLLAPALELISRHNPRL
DPVETLNLLPPLVTAEDVRAFLIEALRAPIFDTRVVKHLSKARSDQVARRLMALQTRRVR
VTDSRICPQCHKRIGNSVIAVHAPRGEVTHYQCREAFSRKLNVVT
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggtaccattctttgcacccaagcgactcgtggcttcccttggagagaaagccgagtca
ctgtgtcagcatggcgacaggctatatgtcggaacgagtaatgggaatctactcatatat
gaagttacaaatgtccctggtgaagatgggggaactagcatcaagttaatggacacaaag
aagggtctcgtcagaagggcaattgaccagctggggttcgtaagagagataaactcgttg
attgtcctctccgaaatgacagtgaccctctttcctgtcccaggattcacaccatccaca
gtgcttgttaaggcaaaggcagcattctcatttggtctgcacacgaccatacaacattca
cctgcctcaacttcggttggtacaggaaaggatgtgtcaaatattgccactcctccatca
gctacgattgggctgcccggaagcatggcagatagcttttcccatcccaacgctggggca
acaactatgtcgataccgagcgtggtcacgcagcttttggttggatgtagacgaaaagtg
gtagtatatacgtggaaagatggagaagctcaagaaattaaagaagctcttatacctcat
tcgcctcgcgcgattgcgtttcttgatgctgacaccgctggatttgcctatgctcctgat
tatgccatattctccatccctacaatgagtatcgtagacgtgactttaccgcttcctacg
gcaacatccgcgactatgggtatgggtgcattcagcggtttgactggatacatgtcactt
ggacttggcgctaaagcgaaacctactattgcgcctgttggtaacggagaggtattgatc
gggaaagacagcgaaggaatctttgtcgggaaagacggaagaccttcgggggagaagaat
attgcatgggtagcctcacccgacgagatagcttatatccgaccctatgttttttccgtg
tttcctgccggtacaataccatccgaaatactcgacgcatcaacaacatctgaatccgct
tctattgttccaagctcgtctagtaacggtgtacagcaaccgccgagcatgatacgcacg
agtgtcgtccagatacgctcatctatctccgctcacgtgttacaaaattttacgatacca
tttcctgtcccctcatccccttctcctgtggggtcggttacggccgataacaagtcttcg
acagatactgtggcgacgacttccacctctacctctcttccgtcaactgcggtccagaat
gcttcaatccacataccccttttctcctcctcaactaagtctccattgtacatgatcact
accccagtggacaggacagtagcggcagcagaaggcagttcgatatggcaatttggtatg
cgtccttgggcagaacaaatcgacgagctcgttgagaatggatattatgcggatgcattg
agcctgcttgatgtcatagacgaaagtgctcttcttgacaaagtacaaagacgcacgcgc
attcgcgctctcaatgctgtatcccaatttcgtgcatcaaaattcaaagaagctcttgat
acttttcttgaattggacattaaccctgcaaaagtcatcgctttgtatcctgaagctgtt
tcgcggagattatctgttcctcagaaagagtgggtatcattgtacggaggacctgcacct
tctcccgacagcgcctccacatctccgctccctggcggcggaagcggtgatccgcccggg
gaagatggtactggaggagagacggtcgggggcaaacacgagaagagctcgtcggagccc
gcaggcactaccataacgaattcactcggtggtagcggtgtaggaactggtgctatcaga
cgtctaaaaggtgctggtttagggttcttgggtgctcatggatataaggagaagggtgat
tctgacactgcgtcaattcacagtgttcgccggggtgttgtcaaagacgatttccgccgc
tccatagaagcactcacaggttaccttgtcgacagacgtaccaaattggacccagtcctc
acctcagtcaatataacattccagaaccaacacgatgatcacaaaccattatctgaagta
cccatcgacgaactctttgctctacccgatgccccattgagcgtattaacaccagaagag
ctgttgagatttgctcaggtggtggatacggcattgtataaatcatacattattatccga
cctggcttgttgaagtcattttgttcgttgccgaattggtgtgaggtaagcgaggttgag
gaagatttgagaggtatccagaggtttgcggagttgaaggatttgtattacgggaagaag
atgcatgcgaaggcattacaactgctcaaagaccttagtgaagaggtatccgacatagaa
gacaagcttcgtccctcaataacctacctccaaaaactaggcccggagtatctagatcat
atattccaattctccagatggatttttgaccagaatgtggacatgggctttgagatcttt
ctctcggaagacgtcgaattacctcaccaagccgttgcgaattacctcgaaagtattgac
tcaaagatttgcgccaagtatctcgagtacatcatagaggaacgtcatgaagagacaccg
gcgtatcacgatagattggcggaattgtatatcagcatgacgctcaatgcgaagagaagg
aatgaggatacgacgaggaaggaggtttatgcaaaattgctccagttcctgaatacgaat
gataaaattggagctgataggttgtatggtatcttatcaccgactgatttgtacgaagct
cgcgcaatattgctaggaagattgggccgacatgatcaggcactcgaactctatgtctac
catctccatgattactacaaagctgaagaatactgcaaacagatctatcaacctaaatca
ccaacatcgaacgtcttccttacccttctgcggatatatctcaggcctacgattaaacca
actccgaccgaccttctcgcaccggcattagaactcatctcgcgacataatccacgttta
gatccggtagaaactctgaatttgttaccgcccttggtcacagcggaagatgtacgagca
ttcctgatagaggcactacgtgcaccgatctttgatacaagggtcgttaaacatttgagt
aaggcgaggagtgatcaagttgcgagacgactgatggcgctacaaacgaggagagtgaga
gtgactgacagtcggatatgcccacagtgtcataagaggattgggaacagcgttatcgcc
gttcatgcacctcggggtgaggtcactcattatcaatgtcgggaggcgttctctcgcaag
ttgaatgtggttacatag
DBGET
integrated database retrieval system
