Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT131867
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Entry
AGABI1DRAFT131867 CDS
T03136
Symbol
AGABI1DRAFT_131867
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AGABI1DRAFT131867 (AGABI1DRAFT_131867)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT131867 (AGABI1DRAFT_131867)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AGABI1DRAFT131867 (AGABI1DRAFT_131867)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
18827555
NCBI-ProteinID:
XP_007333529
JGI:
Agabi_varbur_1_131867
UniProt:
K5XMH9
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MYGKERSTTNDTDQTTDVGFLDFFNSLPKKSPETGTLRLFNRTSGGDSFYCAYGPDAVFV
AQHVFHTKSVIKYLGAGARRLESVTLKVSVAQMLLREALTSKQLRVEIYESENGHGKKGT
TFRLDKEASPGNLQAVEDLLFVNSDILSAPVVMAIQLANVPVSATGVKSSHKAIGVAFAD
TSVRELGVADFIDNDIFSNTESLIIQLSVKEAILPTGTSAGTTERDIDLNKMKGVLERCG
VVITERKPSEFRSKNIADDLPRLLQSQSPVSTADASATISQLSLPTAPAALSALVQYLSL
LTDDSNLGSYKLRTHDLSQYMKLDASALRALNLTENSGTVGLGAKNTTLLGLLNKCKTSQ
GTRLLGTWIKQPLVNLHGIRKRQNLVEIFTNESTTRRILQARIKLYLQRLGKRFKRGNAS
LEDVVRIYQVVLKLPGMITSLEAVQMVSQDYQAAIDEAYLSSLKEHDSHLKKYSEMVEAT
LDLDELDNHNYVIKPDYDERLQQLAEKLKRVRDGLDSEHTVVGDDLNIELDKKLHLENNQ
VYGYCFRLTKTDAKGLSKKFIELGTNKSGVYFTTKTLKNLAEEYKDLTQTYARTQNGLVK
EVVNIAATYAPVLETLDNVVAHLDVILSFAHVSVSAPIPYIKPTLLDKGIGFLSCGQYLA
EYFEGSGNLVLREARHPCLEVQDEINFIPNDIEMVKDRSEFQIITGPNMGGKSTYIRHVG
VIALMAQIGCFVPCEEAQLPVFDSVLCRVGAGDSQLKGVSTFMAEMLETATILRSASKDS
LIIIDELGRGTSTYDGFGLAWAISEHIATKIHAFCLFATHFHELTALDQQLSHVKNLHVV
AHVTQNGSNIRDRDITLLYKVEPGISDQSFGIHVAELANFPENVVKLAKCKADELEDFTG
EKKLDGDISQATITNGIVIMEEILHEWSAQMDGGDVVMSESELSTDSQLHNLQKLTKSYQ
TSIEENSWLQSILTLL
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcaaggaacgctcgacgaccaacgacacagatcaaaccactgacgttggcttt
ctcgatttcttcaatagtctaccaaagaagtccccagaaactggtaccttgagacttttt
aaccgtacaagtggtggggattcgttctactgtgcatatggaccggatgctgtcttcgtc
gcgcaacacgtttttcacaccaaatccgtgatcaagtacctcggcgccggtgcgcggagg
ttggaaagcgtgacgttgaaggtttcggtggcacaaatgctcctcagagaggctttgacc
tcgaagcaacttcgtgttgagatatatgaatccgagaatgggcacgggaagaagggcacg
acattcaggttggataaagaggcatctcctggaaaccttcaagcagtcgaggacctgtta
tttgtcaattcggatattctctctgcccccgtcgtgatggcaatccagctggcaaatgtt
cccgtttctgccaccggagtgaaatcaagccataaggcaattggtgtagcgtttgcggat
actagcgttcgcgaacttggcgtcgcggatttcattgacaatgatattttttctaatacg
gagtcgctcataattcagctttcggtgaaagaggccattctcccaactgggacgtctgct
ggtaccacggagcgagacattgacctcaataaaatgaaaggtgtgcttgagcgctgtggg
gtagtcattaccgaacgcaagcctagcgagttcagatcgaagaatattgctgatgacttg
ccccggcttctacaatctcagtctcccgtgtcgaccgctgatgcatccgcgacgatctcc
cagttatcacttccaacagcacctgcggcactctcggccttggtccaatacttgtcgctc
ctaacggatgactccaatcttgggtcttacaagttacgaacgcatgacctgtcacagtac
atgaaacttgatgcaagcgctttaagagccctcaacctcaccgagaattcgggaaccgtg
ggtctgggggccaaaaacacgactctcctcgggttgcttaataagtgcaagacgtcacaa
ggtacacgtttattgggaacttggatcaaacagcctctggtaaacttgcacggaattcgg
aagcgtcaaaaccttgtcgagatattcacaaatgaaagtactactcggcggattctgcag
gcaagaatcaagctttaccttcaacgtctgggtaaacgtttcaaaagaggcaacgcttct
ctggaggatgtggtacgcatctatcaagttgttctaaagttgccgggcatgataacgtct
ctggaagccgtccagatggttagtcaggattatcaagctgcaatcgatgaagcgtacctt
tcttctctaaaggaacatgattcccatctcaagaaatacagcgaaatggttgaagccact
ctcgatcttgacgaattagacaatcacaactacgtgatcaagcccgactatgatgagcgc
cttcagcaattagcggagaagctcaaaagagtcagggatggattagattctgaacatacc
gtggtgggcgatgatctgaatattgaactcgataagaaactacacctggaaaacaaccaa
gtttacggctattgtttcaggttgacaaagacggatgcgaaagggctttcaaaaaagttt
attgaactaggcacaaacaagagtggtgtttacttcaccaccaagacgttgaagaatctt
gcggaagaatacaaagatctaactcagacctatgctcgtacacaaaacggactcgtcaaa
gaagtggtcaatattgcagcgacgtatgctcctgtgttggaaacactagacaatgtcgtt
gctcacctggatgtgattctaagcttcgcccacgtttctgtgagtgcacccattccatac
atcaagccgacactccttgataaaggtattggattcctttcttgtggtcaatatctcgct
gagtactttgaaggctcgggaaatctggtgctcagggaagcaaggcatccctgtctcgag
gtccaggatgaaataaatttcattccgaacgatatagaaatggttaaagacaggagtgaa
ttccaaatcatcacggggcctaatatgggagggaaatcaacatatattcgacatgttggt
gtcattgctttaatggcacaaattggatgcttcgttccctgcgaggaagcacaattaccg
gttttcgattccgttttatgtagggttggtgcgggtgacagtcaacttaagggtgtttct
actttcatggcggaaatgctggaaacagcaacgattttgcgttccgcaagcaaagactct
ctgataatcatagatgaactcggtcgaggtacctcgacatacgatggtttcggcctggcc
tgggccatttctgaacatattgcgaccaagatccatgcattctgtttatttgccacacat
tttcatgaactaactgcgctggatcaacaactttcgcatgtaaaaaatttgcatgttgtt
gcacatgtaacacagaatggcagtaatatccgtgatcgtgatataacgttactatacaag
gtcgagcctggtatttctgaccaaagctttggtatacatgttgctgagctggctaacttt
cccgaaaatgtggtcaaacttgcgaaatgtaaggcagatgagttggaagactttactgga
gagaaaaagctggatggtgatatatcccaagcaaccattacaaatggtattgtgataatg
gaagagattttacatgaatggagtgctcaaatggatggtggggatgtggttatgtctgaa
tctgagctttctacagatagccagttacacaatctgcaaaagttgacaaagagctatcaa
actagtattgaagaaaattcctggttgcagtctattcttactttactttaa
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