Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT33150
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Entry
AGABI1DRAFT33150 CDS
T03136
Symbol
AGABI1DRAFT_33150
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AGABI1DRAFT33150 (AGABI1DRAFT_33150)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abp03021
]
AGABI1DRAFT33150 (AGABI1DRAFT_33150)
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT33150 (AGABI1DRAFT_33150)
Transcription machinery [BR:
abp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
AGABI1DRAFT33150 (AGABI1DRAFT_33150)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
AGABI1DRAFT33150 (AGABI1DRAFT_33150)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCHC
F-box_5
zf-CCCH_4
zf-CCHC_3
zf-CCHC_2
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
18829042
NCBI-ProteinID:
XP_007324999
JGI:
Agabi_varbur_1_33150
UniProt:
K5Y6J7
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
MTTANPLAGPSVLKDIVNPQFHQNSFPAESYIKVDLGIKLDKDDQICRLFLTPAGCPLGP
LHCPLRHTSPSAQNFQPPKPLPTHPRDRERVSTVCKHWLRGLCKKGDACEFLHEYNLRRM
PECYWFAKYGYCSAGDECLYAHPKERKIECPDYNRGFCKLGPICPRKHVRKVACQLYLTG
FCPMGPECPRGHPKPNLPLASAYEPPPALSNRELGPPPPGFARYADLDRVPGNLAVGPNG
PLQMPQRRDPNEVTCFKCGEKGHYANHCRNRNVPGNRGGTERVRRYVGDE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgcaaaccctcttgccggcccatctgtcctcaaggacatagtcaatccacaa
tttcatcaaaattcatttcctgcagagtcctacatcaaggttgaccttggcataaaatta
gacaaagatgaccagatctgtaggctttttctaacacctgccggctgtccgcttggtccg
cttcattgtccattgcgtcatacttcgccttctgcacagaactttcagcctccaaagcca
ctgccgacgcatccacgcgacagagagcgtgtctctacggtgtgtaaacactggctacgt
ggtctctgcaaaaaaggagatgcctgtgaatttctccacgagtataaccttaggcgcatg
cctgaatgttactggttcgcgaaatatggctattgctctgcgggtgatgagtgcctttac
gctcatccaaaggaacgtaagattgagtgtccagactataaccgcggcttttgtaaacta
ggccccatttgcccccgaaagcacgtacgaaaagtggcatgtcaactctatttgaccgga
ttttgtcccatgggaccagaatgtccacgcggccatccgaagcccaatcttccgttggca
agtgcttacgagcctcctcccgctctctccaaccgcgaacttggtcctcctccgccaggt
tttgctagatatgcagacctagatcgtgttcctggtaatctggctgtggggcccaatggt
cctcttcagatgccccaaagaagagatccgaacgaagtgacatgcttcaagtgcggcgaa
aaggggcactatgccaatcattgtcgcaatagaaatgttcctgggaatcggggtggcact
gaaagagttcgccgatatgtgggtgatgaatga
DBGET
integrated database retrieval system
